Pairwise Alignments

Query, 779 a.a., diguanylate cyclase from Agrobacterium fabrum C58

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  345 bits (885), Expect = 6e-99
 Identities = 202/533 (37%), Positives = 300/533 (56%), Gaps = 21/533 (3%)

Query: 259 DGRIVELNTRFAGLLGREEASLVGRNPDDLFKAVDGQPTYLSRPAPVEA-------IRE- 310
           +GR+  +N  +  L G E   ++G  P  L       PT +     + A       I E 
Sbjct: 338 EGRVEWVNEAYHLLSGYERDQIIGTLPAVLAGPSAANPTAIEAWPTLRAGQVWRGEIHET 397

Query: 311 -RGGQAQVFELGVRTI-EYRGRPCEVMAI-RDLTEKREAQREIEYLARHDVLTGLSNRTM 367
            R G+  + +  +  I +  GR   ++A+  D+T +++A+  I YL+ +D LT L NR +
Sbjct: 398 HRDGRTYIVDKTITPIVDASGRLSHLVAVDEDVTARKKAEERIRYLSNYDTLTRLPNRVL 457

Query: 368 FQTRLHQQIDNGDE-EDEFALLALDLDRFKAVNDIFGHAEGDRVLKKVAAILDECARAGD 426
           F+ RL+Q +          A++ +DLD+F  VND  GHA GD +L  +A+ ++  A   D
Sbjct: 458 FRDRLYQAVVQARRGHGGLAVMFIDLDQFSLVNDTLGHAAGDHLLMTIASRINAAAEEAD 517

Query: 427 VVARLGGDEFVILTARHTKADEARLLAETILGMFALKMNVVNDPTAVGVSIGIAVFPRDG 486
            VAR+GGDEF ++    T AD A  LA  ++ +    +++      +G ++GIA++P+DG
Sbjct: 518 TVARVGGDEFALIQTALTSADSAASLARRLIDVIRTPVDLGGREVVIGANVGIAIYPQDG 577

Query: 487 QDHESIMHAADLALYRAKMGGRGILAFYDPLMDQEARERRQLETDLRLAINR-DELVLNY 545
            D +++M  AD+A+YRA   G     F+   M+ EA  R  LE DLR A++  D+L L+Y
Sbjct: 578 TDPDNLMKNADMAMYRAVKSGDDSCCFFSNEMNAEAAVRLSLEEDLRRALDSGDQLFLHY 637

Query: 546 QPVLSVECGQVVGYEALVRWQHPTRGVVPPDVFIPIAEESGIIISLGEWVLREACRQAST 605
           Q    +E G+ VG EAL RW HPT G +PP  FIP+AE+SG+I++LG+WVL  A  + + 
Sbjct: 638 QLQFCIESGRPVGAEALARWTHPTLGAIPPTRFIPVAEDSGLILALGDWVLGTALAEYAR 697

Query: 606 WAP----HLKIAVNVSPLQFSLANLGHVVCTVLMQTGLSPNRLELEITEAALLKDRKATL 661
           W       L IAVN+S +QF    L   V  +L Q G+ P  LELE+TE+ L++D    +
Sbjct: 698 WRAAGCGRLTIAVNMSAVQFRQKGLVERVTDLLAQHGVPPEDLELELTESMLMQDADQAV 757

Query: 662 VILNQLKALGVAIVMDDFGTGYSSLSNLQSFPFDKIKIDRSFIAAMSEDDNARAIVRAVI 721
             L  L   G+ + +DDFGTGYSSL  L+ F  DK+K+D+SF+  ++ED N   I RA+I
Sbjct: 758 AQLTALSQAGIRLSIDDFGTGYSSLGYLKLFRVDKLKVDQSFVRDVTEDGNDAVIARAII 817

Query: 722 GLGRSLDLPVTAEGIETDAQYRMVVDEGCAQAQGYLFGRPDVAPAPAASTAKR 774
            LG SL L V AEG+ET  Q   +  EGC   QGYL   P+    P  + A+R
Sbjct: 818 NLGHSLGLEVIAEGVETPEQMAYLRREGCDVVQGYLMAYPE----PGETVARR 866