Pairwise Alignments

Query, 688 a.a., ATP-dependent DNA helicase from Agrobacterium fabrum C58

Subject, 689 a.a., UvrD2 DNA helicase from Sinorhizobium meliloti 1021

 Score = 1140 bits (2950), Expect = 0.0
 Identities = 562/689 (81%), Positives = 624/689 (90%), Gaps = 1/689 (0%)

Query: 1   MAVA-YLDKLNEQQRKAVEHGVGLADGETAGPLLIIAGAGSGKTNTLAHRVAHLIVNGAD 59
           MA A +L+KLNE+QR AVE+G+G  +G  AGPLLIIAGAGSGKTNTLAHRVAHLIVNGAD
Sbjct: 1   MATATHLEKLNERQRCAVEYGIGAEEGAQAGPLLIIAGAGSGKTNTLAHRVAHLIVNGAD 60

Query: 60  PRRILLMTFSRRAASEMSRRVERICKQVIGANSAIMTDALAWSGTFHGIGARLLRIYAEQ 119
           PRRILLMTFSRRAA+EMSRRVERIC QV+G +S +MTDAL+W+GTFHGIGARLLRIYAEQ
Sbjct: 61  PRRILLMTFSRRAAAEMSRRVERICAQVLGRSSGMMTDALSWAGTFHGIGARLLRIYAEQ 120

Query: 120 IGLNIDFTIHDREDSADLMNLVRHELGFSKTESRFPTKGTCLAIYSRAVNSQTPLKDILR 179
           IGLN +FTIHDREDSADL+NL+RHELGFSKTESRFPTKGTCLAIYSR VN++  L ++LR
Sbjct: 121 IGLNAEFTIHDREDSADLINLIRHELGFSKTESRFPTKGTCLAIYSRTVNAEMRLNEVLR 180

Query: 180 QHYPWVADWQSELKELFAAYVEAKQIQNVLDYDDLLLYWAQMVSDPILADDIGNRFDHVM 239
             YPWVA W+ +L+ELFA YVEAKQ QNVLDYDDLLLYWAQMVSD  LADDIGNRFD+V+
Sbjct: 181 SWYPWVAGWEQQLQELFAGYVEAKQAQNVLDYDDLLLYWAQMVSDASLADDIGNRFDYVL 240

Query: 240 VDEYQDTNRLQASVLMAMKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPACFNPAADII 299
           VDEYQDTN+LQ+SVL+A+KP GRGLTVVGDDAQSIYSFRAATVRNILDFP  F PAA+I+
Sbjct: 241 VDEYQDTNKLQSSVLLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPKQFAPAAEIV 300

Query: 300 TLDRNYRSTQPILAAANGVIDLARERFTKNLWTERQSLERPKLVTVKDETEQANFIIDQI 359
           TLDRNYRSTQPILAAANGVIDLARERFTKNLWT+R+S ERPKL+TVKDE +QAN I++Q+
Sbjct: 301 TLDRNYRSTQPILAAANGVIDLARERFTKNLWTDRESAERPKLLTVKDEADQANCIVEQV 360

Query: 360 LANRETGTTLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRF 419
           LANRE+G  LKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRF
Sbjct: 361 LANRESGMLLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRF 420

Query: 420 AQNPRDRVAGFRLLQMLPGIGPKKAGNILDTIAPDPEPLLALAEIPPPPKTGDDWTAFTQ 479
           AQNPRDRVAGFRLLQMLPG+GP+ AG ILDTIA DPEPL+AL E+P PP++G DW +  +
Sbjct: 421 AQNPRDRVAGFRLLQMLPGVGPQTAGKILDTIAADPEPLMALGEVPAPPRSGTDWMSLVE 480

Query: 480 LLVGLRRGPNGWPGEIGLARLWYEPHLERIHEDADTRKADLQQLEQIAGGYPSRERFLTE 539
           LL  LR+  + WP EI +AR+WYEPHLERIHEDA+TR+ADL QLEQIA GYPSRERFLTE
Sbjct: 481 LLQALRKPGSAWPTEIEMARMWYEPHLERIHEDAETRRADLVQLEQIAAGYPSRERFLTE 540

Query: 540 LTLDPPDATSDQAGVPLLDEDYLSLSTIHSAKGQEWRSVFILNVVDGCIPSDLGVGTSQE 599
           LTLDPPDATSDQAGVPLLDEDYL LSTIHSAKGQEWRSVF+LNVVDGCIPSDL  GTS E
Sbjct: 541 LTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFMLNVVDGCIPSDLATGTSHE 600

Query: 600 LEEERRLLYVAMTRAKDNLSLITPQRFFTGGQSSQGDRHVYAARTRFIPATLLQFFETMS 659
           LEEERRLLYV MTRAKD L+L+ PQRFFTGGQ +QGDRHVYA+RTRFIPATLLQFFE+ +
Sbjct: 601 LEEERRLLYVGMTRAKDQLALMVPQRFFTGGQHAQGDRHVYASRTRFIPATLLQFFESAN 660

Query: 660 WPLVSIAASERSAQQIRIDVGARMRAMWK 688
           WP+ S   SERSA+QIRIDV ARMR MW+
Sbjct: 661 WPVASPNVSERSAKQIRIDVAARMRTMWR 689