Pairwise Alignments

Query, 309 a.a., IS3 family transposase from Agrobacterium fabrum C58

Subject, 277 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  214 bits (546), Expect = 1e-60
 Identities = 119/265 (44%), Positives = 150/265 (56%), Gaps = 2/265 (0%)

Query: 20  LSERRACQIISADRKMIRYRSCRPPEVE-LRLRLRDLANERRRFGYRRLFILLRRDGEPS 78
           +SERRAC++    R   R+     P  + L  RL +LA  RRRFGYRRL  LLR +    
Sbjct: 7   ISERRACRLAGISRDAFRHAPTPTPATQTLSARLVELAQARRRFGYRRLHDLLRPESPQV 66

Query: 79  GVNRIYRLYREEGLSVRKRKARRRAVGTRAPILVEAKANARWSLDFVHDQFACGRRFRVL 138
              +IYRLYRE  LSVR+RK  +     R P+      N   S+DFV DQ A GRR + L
Sbjct: 67  NHKKIYRLYREAKLSVRRRKKAKFPAAQRQPLRPARHPNEVISMDFVFDQLASGRRIKCL 126

Query: 139 NIVDDVTRECLAAIPDTSISGRRVARELTALIPRRGKPGVIVSDNGTELTSNAILAWSKD 198
            + DD T EC+    D  ISG  V R L  +   RG P  + +DNG E TS A + W++ 
Sbjct: 127 TVADDFTHECVDIAVDHGISGAYVVRVLEQIACFRGYPRAVRTDNGPEFTSRAFITWAQQ 186

Query: 199 HKVDWHYIAPGRPMQNGYVESFNGRMRDELLNESLFFGLDHARSAIAEWADDYNHFRPHS 258
             ++   I PG+PMQNGY+ESFNG+ RDE LNE  F  L  AR  IA+W  D+N  RPHS
Sbjct: 187 RGIEHILIEPGKPMQNGYIESFNGKFRDECLNEHWFTSLIQAREVIADWRRDFNEVRPHS 246

Query: 259 SLGYQTPAAYAGT-IAATGSNATQY 282
           S G   PA +A    A TG+NA  +
Sbjct: 247 SCGRIPPAQFASNHRAQTGNNAVPF 271