Pairwise Alignments

Query, 309 a.a., IS3 family transposase from Agrobacterium fabrum C58

Subject, 280 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  204 bits (520), Expect = 1e-57
 Identities = 114/257 (44%), Positives = 151/257 (58%)

Query: 19  GLSERRACQIISADRKMIRYRSCRPPEVELRLRLRDLANERRRFGYRRLFILLRRDGEPS 78
           G SERRA  +I      +RY        ELR R+  LA+  RR+G   +++ LR++G   
Sbjct: 17  GASERRALAVIGMSASALRYCPREDRNGELRERICALAHRHRRYGVGMIYLKLRQEGRIV 76

Query: 79  GVNRIYRLYREEGLSVRKRKARRRAVGTRAPILVEAKANARWSLDFVHDQFACGRRFRVL 138
              R+ RLYRE+ L VR+RK ++  +G R P+L  ++AN  WS+DFV D+ A GR  + L
Sbjct: 77  NYKRVERLYREQQLQVRRRKRKKVPIGERQPLLRPSQANQVWSMDFVFDRTAEGRVIKCL 136

Query: 139 NIVDDVTRECLAAIPDTSISGRRVARELTALIPRRGKPGVIVSDNGTELTSNAILAWSKD 198
            IVDD T E +A   + +ISG  V R L  L   RG P VI +DNG E    A++AW+  
Sbjct: 137 VIVDDATHEVVAIEVERAISGHGVTRVLDRLAHSRGLPKVIRTDNGKEFCGKAMVAWAHA 196

Query: 199 HKVDWHYIAPGRPMQNGYVESFNGRMRDELLNESLFFGLDHARSAIAEWADDYNHFRPHS 258
             V    I PG+P QN YVESFNGR+RDE LNE  F  L HAR+ I  W  +Y+  RP  
Sbjct: 197 RNVQLLLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYHEDRPKK 256

Query: 259 SLGYQTPAAYAGTIAAT 275
           ++G  TPAAYA  +A T
Sbjct: 257 AIGGMTPAAYAQHLANT 273