Pairwise Alignments

Query, 256 a.a., IclR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 280 a.a., beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family from Pseudomonas stutzeri RCH2

 Score = 79.3 bits (194), Expect = 8e-20
 Identities = 62/245 (25%), Positives = 126/245 (51%), Gaps = 15/245 (6%)

Query: 14  RTIAMLELLALAEEPLKLSDVAHQLDIPKSACHRILTSLIENGWAWQSPESDCYALTMRM 73
           R +A++      +  L ++ ++H+ +IP++A  R L +L++ G+   + +   Y+L  ++
Sbjct: 39  RGLAVIHAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLMKLGYV--TTDGRTYSLLPKV 96

Query: 74  ALVGQKQLARLQVSDLRQPILNDLAERTRELVRLTAVQNNTLVWVGSARGRRSGLVFEPD 133
             +G   L+   ++   QPIL+ L+E+  E   + A++ + +++V  AR      +   D
Sbjct: 97  LTLGHAYLSSTPLAVTAQPILDRLSEQLHEACSMAALEGDEVLYV--ARSATPQRLISVD 154

Query: 134 MSAG--IVPYATANGKIWLASLDRERALRIALDAGLGQPGQQ--AAKAINTIEALNKELD 189
           +S G  +  Y T+ G+I LA+LD       ALD  L +   Q   ++ ++T EAL   +D
Sbjct: 155 LSVGSRLPAYCTSMGRILLAALD-----DAALDDYLARADLQIKTSRTLHTPEALRSSID 209

Query: 190 SVSRLGYGRAVGEAEEGVGAIAVAIRQGK-DVVGTMSVAAPLTRLT-DERVAEILPLLVR 247
            + R G+     E E G+ ++AV ++     V+  ++V     R++  E     LP+L+ 
Sbjct: 210 DIRRQGWVIIDQELEVGLRSLAVPLKDSAGQVLAALNVGTHAGRVSRQELETRFLPVLLE 269

Query: 248 AASDM 252
           A+ ++
Sbjct: 270 ASREL 274