Pairwise Alignments

Query, 561 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  202 bits (513), Expect = 5e-56
 Identities = 140/550 (25%), Positives = 270/550 (49%), Gaps = 14/550 (2%)

Query: 2   TDMAATATTGGFRLRLPG---FWTSVTVFAVILLAIFLILPIFSVFFISFFDAKTGAFGF 58
           T + A  T    RL   G   F     +  ++L+ IF++ P  ++F   F D   G +  
Sbjct: 126 TALGAIMTLAFARLEYLGGDHFVIGSLISIILLIVIFIVYPSIAIFLPMFKD-DMGNWTA 184

Query: 59  SNYAEVFTRRFYTVALWNTLVIGVLGMLGACLLGIPLAFCTSRYRIKGRTFIATFAVLVL 118
             +  + ++      ++N++ +G+   +GA   G+  A  T+R   +       F++L +
Sbjct: 185 WQFMTILSQSHTLTVIYNSIALGIAVGVGATFFGLIFAIYTTRIAKRSAFIARVFSILPI 244

Query: 119 CAPPFIGAYAWIMLFGANGAVTNLL--SFAGISLPTIYGIPGIVMVFSLKFFPYIYLMTE 176
             PPFI      ++ G +G +T L+   F       +YG  GI +   L F P  +++ +
Sbjct: 245 VTPPFIVGLGVTLMLGRSGYITELMVDGFGLQKTNWLYGFTGIWLAQVLAFAPMSFMILD 304

Query: 177 NALNTINKSYEDAAENLGCTAFQRFRKITLPLVFPAVSTGAIICFVLSIADFGTPAILGK 236
            AL +++ S E+A+  L    +Q F  I +PL+ PA++   +I FV S+ADF  P +LG 
Sbjct: 305 GALKSLHPSLEEASYTLKANRYQTFFGIIMPLLKPALANSFLIIFVQSLADFSNPLVLGG 364

Query: 237 GIRTLSTIAYAQYTSEMAGTPTMAVTISMVMIAISMAALLLQRHILAKRRYASSLTNRPV 296
               L+T  Y  Y +        A T+  V++  S+A  ++Q   + +R Y + ++ +  
Sbjct: 365 SFDVLATQIYF-YIAGAQLDYASASTLGSVLLLFSLAIFVVQYLWIGQRSYVT-ISGKAY 422

Query: 297 KQSMRPLKSFIVHGFC---YLVVFIAMLPSLTVIYTSFLATSGPVFTGGFG--LDSYSRI 351
           +  ++ + + +  G     Y  +   +L   ++ + SF    G  +T  F   L+ +   
Sbjct: 423 RGDVQEMPASLKLGVTVTLYAWMIFNVLLYGSIFFGSFTVNWGVDYTLTFKNYLNLFGNG 482

Query: 352 LRDSP-QAIANSFMFALAAVVLIAIVSGLLSFIVVRRDNAVSGSLDLLLMVPYLIPGVVM 410
           + D    ++  + ++A  A  + A+   L++++VVR+       ++   M+ + +PG V 
Sbjct: 483 MSDGAWPSLITTMIYAGVAAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVA 542

Query: 411 AIGYVTTFRYPPFDITGTALIIVLLVFIRRLPYGVRSTTSILRQIKPSIEEAAVNLGASP 470
            + Y+  F   P  +TGTA I+V+ + +R +P G+RS  + L Q+  S++EA+++L AS 
Sbjct: 543 GVSYILAFNDAPIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASS 602

Query: 471 AKTFLSVTVPLMLPGLIIGSLMSFITAINELSSTLILYTARTITMPVLIYIQVIDGEFGT 530
            +T   + +PL+ P ++   + SF+ A+  +S+ + L T  T      I  +V DGE+G 
Sbjct: 603 LQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFLVTPETRVATSYILNRVEDGEYGI 662

Query: 531 AAALSTLLLV 540
           A A  ++L+V
Sbjct: 663 AIAYGSVLIV 672