Pairwise Alignments

Query, 361 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  249 bits (636), Expect = 8e-71
 Identities = 136/320 (42%), Positives = 198/320 (61%), Gaps = 8/320 (2%)

Query: 4   VEITSIKKSYRDVVALSDINISIPSGSFFTLLGPSGCGKTTLLRTIAGFHQQDSGSISIE 63
           + ++ I KS+     + ++N+ +  G F T+LGPSGCGKTT+LR IAGF   D G I ++
Sbjct: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77

Query: 64  RQAIEHVPAHKRDVGMVFQDYAVFPHISVFDNIAFGLKQRKSSSAEIRERVGKILDVVQL 123
            Q +  VPA +R V  VFQ YA+FPH++VF+N+AFGL+ +K   +EI  RV + L +V+L
Sbjct: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137

Query: 124 APYAKRMPHELSGGQQQRVGLARALVINPKVLLMDEPLSNLDAKLRVDLRRELREIQQAM 183
           A  A+R PH+LSGGQQQR+ +ARA+V  PKVLL+DE LS LD KLR  ++ EL+++Q+ +
Sbjct: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197

Query: 184 NITTVYVTHDQEEALAMSDLVCVMYGGVIQQAAPPWEVYNNPANRFVASFVGANNFL--- 240
            IT ++VTHDQEEAL+MSD + VM  G I+Q   P E+Y +P N FVA F+G  N     
Sbjct: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257

Query: 241 TLDRTGG---QTSISSLKVTLPQADAISKDRTIVAAIRPEAISIGPSIGNCDERIELPVT 297
           T+DR      +  I  ++  +   D +     +   +RPE + I     + ++ I   VT
Sbjct: 258 TIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIKESEEKGIVGHVT 317

Query: 298 IRQVSFTGREMNVAAVLSSG 317
            R  ++ G  +     L SG
Sbjct: 318 DR--TYKGMTLESVVELESG 335