Pairwise Alignments

Query, 357 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

Subject, 382 a.a., N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family from Xanthomonas campestris pv. campestris strain 8004

 Score =  130 bits (328), Expect = 4e-35
 Identities = 95/343 (27%), Positives = 157/343 (45%), Gaps = 6/343 (1%)

Query: 1   MSRIELAREMDVSAPTLTRLTSSLLESGLVVEAEEARNDGKRGKPSTAIEINPNGLFTLG 60
           ++R +L+R   ++  T  RL  SL   G+V   E     G RGKP  A+ + P    TLG
Sbjct: 36  LTRADLSRGTGLTVQTAVRLIESLQARGMVRMGEGLARPG-RGKPGIAVSLRPGHGHTLG 94

Query: 61  VYFNPDDLRVCIADLNGTIRHEVRSDLEDYSFEHIMETAKAAARQVLEKAKVKKKDVLGC 120
           V    D L + + D  G +       L D S   ++   +A    +L          LG 
Sbjct: 95  VSIATDALTLALMDFAGQVLGVQELPLTDPSAAGVLAQLQAGDAALLASLPHAPGPRLGI 154

Query: 121 GISFPGHFKRDRGHVFRIRQFESWHDIDVDKDFQPYFDFPVFHENDGNTVILSELYYGAG 180
           G++  G F    G +       +  +  +          PV+ +NDG+     E   G G
Sbjct: 155 GVAMTGFFTGQDGRINPPDPLRALGEFALCPWLAEACAQPVWMDNDGSVAAAGEAMLGVG 214

Query: 181 RSIRNFAMIWLTYGIGGAVVVQRHLYRGTNGNAGEFGGLFPKSH-PRPSGQDLCDTLAVH 239
           R  R+FA ++L+YG+GG +V+   + RG  GNAGEF G+ P     R + + L + LA  
Sbjct: 215 RRHRDFAYLYLSYGLGGGLVIDGKVLRGARGNAGEFAGMLPAQRLERATLELLRELLAED 274

Query: 240 GMDIRRLKDIDESYSDH-PAVVAWLERATDQLRLLALTVARTIDPGAIIFGGSLPDWILE 298
           G+++  ++ +  +Y    PA+  WL R+   + L+   +    DP AI+FGG LP  +  
Sbjct: 275 GVELPDIRALLAAYDPRWPAIERWLARSAPGVSLIVSAITAVCDPEAIVFGGRLPADLAH 334

Query: 299 HIVQ--RIGSLEMLGEDFFVEPPEIRKSMMSDLPHLGAASIPI 339
            ++   RI +    G+   + P  +     +D   +GAA++P+
Sbjct: 335 RLIAAVRIDNQPRRGQARPI-PLLLPAEAPADACAIGAATLPL 376