Pairwise Alignments

Query, 357 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

Subject, 379 a.a., ROK family transcriptional regulator from Rahnella sp. WP5

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 73/301 (24%), Positives = 129/301 (42%), Gaps = 17/301 (5%)

Query: 1   MSRIELAREMDVSAPTLTRLTSSLLESGLVVEAEEARNDGKRGKPSTAIEINPNGLFTLG 60
           +SR ELA+   +S   +  +   ++E+G + EAE     G+ G+PS  + ++P+G +  G
Sbjct: 19  LSRTELAQSSGMSKAAIGGVVREMIEAGFLHEAETVPGSGQ-GRPSVRLVVHPDGAWFAG 77

Query: 61  VYFNPDDLRVCIADLNGTIRHEVRSDLEDYSFEHIMETAKAAARQVLEKAKVKKKDVLGC 120
           V    +  ++ + +L+G I   V S   D   + +     +A   +LE      K ++G 
Sbjct: 78  VSLLQNPAQMALINLHGEILSRV-SFAADADPQQLAANIASALPALLEPHPEAAKKLVGL 136

Query: 121 GISFPGHFKRDRGHVFRIRQFESWHDIDVDKDFQPYFDFPVFHENDGNTVILSELYYGAG 180
           G++  G     +    +      W D+ + +         V  END   + +SE  +G  
Sbjct: 137 GVTLSGLIDEHQSTCVQSALL-GWRDVPLARLISQATGMDVAIENDAKALAVSEKSFGQA 195

Query: 181 RSIRNFAMIWLTYGIGGAVVVQRHLYRGTNGNAGEFG--GLFPKSHPRPSGQDLC-DTLA 237
           R + +F ++    GIG A  +   L+RG +G AGE     L     P   G+  C DTLA
Sbjct: 196 RDLSSFTLVSHGAGIGSAHFIAGQLHRGLHGGAGEIAHCTLELNGSPCRCGKRGCLDTLA 255

Query: 238 ----------VHGMDIRRLKDIDE-SYSDHPAVVAWLERATDQLRLLALTVARTIDPGAI 286
                       G+D   +  +++ +     A +  L RA   L L    + +  DP  I
Sbjct: 256 SLNAIAEMAKAEGLDASTIGGLEQLAMQGQTAAIRILHRAGSALGLAISHLIQINDPDLI 315

Query: 287 I 287
           +
Sbjct: 316 L 316