Pairwise Alignments

Query, 357 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

Subject, 370 a.a., ROK family transcriptional regulator from Rahnella sp. WP5

 Score =  172 bits (437), Expect = 1e-47
 Identities = 109/345 (31%), Positives = 172/345 (49%), Gaps = 10/345 (2%)

Query: 1   MSRIELAREMDVSAPTLTRLTSSLLESGLVVEAEEARNDGKRGKPSTAIEINPNGLFTLG 60
           ++R ELAR  +++A  +T+    LL SGLV+E E  RN G+RG+PS  + +NP G   +G
Sbjct: 27  VTRAELARYSNLTAGAITQQCRELLFSGLVIEGE--RNMGQRGQPSLPLRLNPGGACAVG 84

Query: 61  VYFNPDDLRVCIADLNGTIRHEVRSD-LEDYSFEHIMETAKAAARQVLEKAKVKKKDVLG 119
           + F+P  + + + DL+G     +     E+      ++  K      L+K ++K   +LG
Sbjct: 85  LAFSPGFIDMTLVDLSGRKLFSISEPHQENQPLATTLKQIKNLVELTLKKRQLKHARILG 144

Query: 120 CGISFPGHFKRDRGHVFRIRQFESWHDIDVDKDFQPYFDFPVFHENDGNTVILSELYYGA 179
            G + PG  K D      +    SW D+D+ + F+    +P + EN+ N   + ELY G 
Sbjct: 145 MGYAVPGFLKPDGKKRHCVAWLSSWRDVDLQQAFEDNLPWPTWVENNANASAIGELYSGT 204

Query: 180 GRSIRNFAMIWLTYGIGGAVVVQRHLYRGTNGNAGEFGGLFPKSHPRPSGQDLCDTLAVH 239
             S R+   I L YGIG  ++    L RG   NAGE G  FP   PRPS +DL  TL   
Sbjct: 205 WNSYRDITFIDLGYGIGAGIIADGKLLRGGFLNAGEVGMAFPGDKPRPSYKDLVATLTQA 264

Query: 240 GMDIRRLKDIDESYSDHPAVVAWLERATDQLRLLALTVARTIDPGAIIFGGSLPDWILEH 299
           G+   +L  +  +   HP +  W  R  DQ+    +   + +DP  II GG++P  I E 
Sbjct: 265 GLSEAQLPAL--TAEQHPLLEVWFSRCCDQVEQSIMGCLQWLDPQLIILGGAMPKTITER 322

Query: 300 IVQRIGSLEMLGEDFFVEPPEIR---KSMMSDLPHLGAASIPIYR 341
           + + +   + L      + P++R     M ++    GAA IP+Y+
Sbjct: 323 LTEVL--TQRLDARLDPDRPKVRLANSPMGAESASWGAAMIPLYQ 365