Pairwise Alignments

Query, 284 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 314 a.a., Inner membrane ABC transporter permease protein YdcU from Enterobacter sp. TBS_079

 Score = 76.3 bits (186), Expect = 8e-19
 Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 28/285 (9%)

Query: 13  LLLLLPGVGYLLVFFGGPLLSALIGSFRQEDGSFTLMFYQRIFTRASMIRGLTTSIYYGV 72
           LLLL P + + +V+ G  L     G +  +D  FT+     + T A+++     + Y  +
Sbjct: 32  LLLLAPLMWFGIVYLGSLLTLLWQGFYTFDD--FTMAVTPEL-TFANILALFNPANYDII 88

Query: 73  -----MPVIVSLAASV---PLALLIRRSFLGR--KLFSGLYKLPMAVPGIIVGLMVIVVF 122
                M + V++A+++   P+A  + R   G+    F     LPM    I+      ++ 
Sbjct: 89  LRTLMMAIAVTIASAILAFPMAWYMARYTRGKWKAFFYIAVMLPMWASYIVKAYAWTLLL 148

Query: 123 ERGGFLDRLVAPLGLE--------LPKL---VRDGWGIGVILASVWKQIPFMTLIITSAF 171
            + G     ++ LGLE        LP +        G+G  L  V+  +PFM L + +A 
Sbjct: 149 AKDGVAQWFLSHLGLEPILTAILTLPAIGGNTLSTSGLGRFLVFVYIWLPFMILPVQAAL 208

Query: 172 AAIPEDIRYALRTLGASRLKTFFFVEVPLAMPGITAAILLTFIGSMGSYAIPDIVGPPTA 231
             +P  +  A   LGA   +TF +V +PLA+PGI A  + TF  ++G + +P +VGPP  
Sbjct: 209 ERLPASLLQASADLGARPRQTFRYVVLPLAIPGIAAGSIFTFSLTLGDFIVPQLVGPPGY 268

Query: 232 RPLSVLMIQEFNQGRFNQVYAMGMILSLFAVTVLILYYSLTSRIG 276
              +++  Q+   G       M    +L  + ++ LY +   R+G
Sbjct: 269 FIGNMVYSQQGAIGNM----PMAAAFTLVPIVLISLYLAFVKRLG 309