Pairwise Alignments

Query, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 377 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  263 bits (673), Expect = 4e-75
 Identities = 140/318 (44%), Positives = 205/318 (64%), Gaps = 12/318 (3%)

Query: 1   MSELEISNISKDYGASRALHPVSITVERGEFVTILGPSGCGKSTLLRILTGISQPSGGEI 60
           M +L ++ + K YG    L  + + V  GEFV  +GPSGCGKSTLLR++ G+ + + G+I
Sbjct: 1   MGQLTLNKVQKFYGTYEVLKSIELEVGNGEFVVFVGPSGCGKSTLLRMIAGLDETTAGDI 60

Query: 61  RLGGKRIDQAQPEARDIAMVFQSYALFPHMSVAKNLGFGLKMKKVAKDERARRIAHALEI 120
            + GKR++   P  R IAMVFQSYAL+PHMSV +N+ F L+++K+ +++   ++ HA  I
Sbjct: 61  VIDGKRVNDLPPVRRGIAMVFQSYALYPHMSVFENIAFPLRVEKMPEEKLKAKVEHAARI 120

Query: 121 CNLTGLVDRMPRQLSGGQQQRVALARAIVMQPSLLLFDEPLSNLDAKLRDTLRHELTELH 180
            +L   +++ P  LSGGQ+QRVA+ RAIV +P + LFDEPLSNLDA LR  +R EL +LH
Sbjct: 121 LHLDQRLEQKPGMLSGGQRQRVAIGRAIVREPKIFLFDEPLSNLDAALRADMRIELAKLH 180

Query: 181 RRIGATSLYVTHDQAEAMAMSDRIVVMNAGRVVEIGTPLELYRAPKHAFTAGFLG--QTN 238
           R++ AT +YVTHDQ EAM M+DRIVV+NAG + + G PLELY  P + F AGF+G  + N
Sbjct: 181 RQLKATMIYVTHDQVEAMTMADRIVVLNAGEIAQTGAPLELYHKPANIFVAGFIGHPKMN 240

Query: 239 LLPVSAEG---QQAQLPW-GQSVTLDQA-----AAGNVQISARPENIHI-CADQAGDGTV 288
            LPV+  G      ++ + GQ++ +        A+  + +  RPE+I +  AD     T 
Sbjct: 241 FLPVACTGVTDAGVEVDYKGQTILVPVVPRAGMASRTLTLGVRPEHIQMGAADLTLTVTP 300

Query: 289 SAVSFMGANALYTVEIGG 306
           S +  +GA+ +  V + G
Sbjct: 301 SVIERLGAHTVAYVALDG 318