Pairwise Alignments

Query, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 358 a.a., ABC transporter for Lactose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  267 bits (683), Expect = 3e-76
 Identities = 147/350 (42%), Positives = 213/350 (60%), Gaps = 12/350 (3%)

Query: 1   MSELEISNISKDYGASRALHPVSITVERGEFVTILGPSGCGKSTLLRILTGISQPSGGEI 60
           MSEL++S++ K YG    +  V + ++ GEFV  +GPSGCGKSTLLR++ G+ + S G++
Sbjct: 1   MSELQLSDVRKSYGGLEVIKGVDLDIKSGEFVVFVGPSGCGKSTLLRMIAGLEEISSGDL 60

Query: 61  RLGGKRIDQAQPEARDIAMVFQSYALFPHMSVAKNLGFGLKMKKVAKDERARRIAHALEI 120
            +   R++   P  R IAMVFQSYAL+PHM+V +N+GF L+   V + E  +R+  A  I
Sbjct: 61  TIDDVRMNDVDPSKRGIAMVFQSYALYPHMTVRENMGFALRFAGVPRAEIEKRVNEAAHI 120

Query: 121 CNLTGLVDRMPRQLSGGQQQRVALARAIVMQPSLLLFDEPLSNLDAKLRDTLRHELTELH 180
             L  L+DR P+QLSGGQ+QRVA+ RAIV  P + LFDEPLSNLDA+LR  +R E+  LH
Sbjct: 121 LELGALLDRKPKQLSGGQRQRVAIGRAIVRHPKIFLFDEPLSNLDAELRVHMRIEIARLH 180

Query: 181 RRIGATSLYVTHDQAEAMAMSDRIVVMNAGRVVEIGTPLELYRAPKHAFTAGFLGQTNL- 239
           +++  T +YVTHDQ EAM ++D+IVVM AG V ++G+PL+LY  P + F AGF+G   + 
Sbjct: 181 KQLATTIVYVTHDQVEAMTLADKIVVMRAGVVEQVGSPLDLYDDPANLFVAGFIGSPKMN 240

Query: 240 -----LPVSAEGQQAQLP-WGQS---VTLDQAAAGNVQISARPENIHICADQAGDGTVSA 290
                + +  +   A+LP +G +   VTL  AA   V I  RPE+       A D  +  
Sbjct: 241 FLKGVIEIDEDQAYARLPDYGDAKIPVTLQAAAGTAVTIGIRPEHFDEAGPAALDLAIDM 300

Query: 291 VSFMGANAL-YTVEIGGRQIRVSQSGAETLIDAGQRVALQF-PGSVHLLD 338
           +  +G     Y    G  ++ V ++     +  G R+  +F P SV + D
Sbjct: 301 LEHLGGETFAYARHHGNGELIVVETKNGRGLKTGDRLTARFDPVSVLVFD 350