Pairwise Alignments

Query, 409 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 382 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 23/282 (8%)

Query: 77  EAKYGIKVAYSDVKG-DQANQQLIAVQAAGQDSP--VDAYFAGGGSYPLLSSKGVVGNIA 133
           +++YG+ + +  V    +   +LIA +AAG++    VD  +  G ++  + +  ++    
Sbjct: 57  KSRYGVTLQHVKVTDIAETTTRLIAEKAAGKNEQGSVDLVWINGENFKSMKNNQLLYG-P 115

Query: 134 LTKILPNMANYNPEL-AETVFGKPHGGSFPLVHLNQTAIGYHSAFVKAEDVPKSFEDLLV 192
             + LPN    +  L  ++ F +P  G      + Q    +    V   + P SF +LL 
Sbjct: 116 FVEDLPNWPKVDKSLPVDSDFSEPTEGLEAPWGVGQLVFIHDKQQVN--NPPASFAELLS 173

Query: 193 WAEKNPKRLGVTLPAKGGSGGGFIYSVALNYLTGDCRKQLTDYNQTLQQAEDWAMESECL 252
           +A+  P R+    P +   G  F+ +  +         +LT Y   L QA + A   +  
Sbjct: 174 YAQAFPNRISYPQPPEF-HGTSFLKAALI---------ELTHYAPELNQAVEPATFEQLT 223

Query: 253 TPVWDYYRRLLAVA-----ELTNGNADTLNLINNQQLYMGTVWE-DQVMSFLGTKQLPDS 306
            P+W Y   L AVA     +   G+A  + L+++ QL +   +  + V S   T +L  +
Sbjct: 224 QPLWQYLDELHAVAWRKGKQFPAGSAQMMQLLDDGQLDLAITFNPNAVFSAQATGKLAPT 283

Query: 307 FRVTLLEKGQVGSGDAMFVPANAKNVASALLLIDMAMSKEFQ 348
            +   ++KG + +   + +P NA     AL+ I+  +S E Q
Sbjct: 284 AQSYAMKKGALTNIHFLAIPWNANAKEGALVAINFLLSDEAQ 325