Pairwise Alignments

Query, 382 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

Subject, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 74/377 (19%), Positives = 160/377 (42%), Gaps = 25/377 (6%)

Query: 20  NERLILDIVRRHGPIARSSITGHTNLTQQSVHRLIEALQERGLL-QTGAPLKGTRGQPSP 78
           N   +  ++ + GPI+R  ++  + L   S+ ++   L +  L+ +T      +RG+P+ 
Sbjct: 16  NAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETTVQEAISRGRPAV 75

Query: 79  TIELVPEAAYSLGISINTDSVVICIADFRCNVIVEEKLKMLPEDREETLAALSQALDRLL 138
            ++        L + +    + I + +    V+++ K+ +   D+++ LA L   ++   
Sbjct: 76  GLQTNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFF 135

Query: 139 AEHGIPRERLLGLGFSMSGFFVSEDRAFNAPEPLRDWSLMDLKPILEKRFRLPVWLENNA 198
             +    +R+  +  ++ G  V+ ++      P  +   + L P + K   LPV++ N+ 
Sbjct: 136 QTYAAQLDRVTSIAITLPGL-VNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDT 194

Query: 199 TTGAIGESLRGVGSWCQTFAYLSFNYGFGGGLILGGQPFHGFHGNAGEFSGIYSPDESSK 258
              A+ E L G          +S ++G G G++L G+   G HGN GE   I    +  +
Sbjct: 195 RAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKR 254

Query: 259 RPALQY-LIATLQKNGVDIHSIEPLYQQFDPAWPGVEEWLN----------------ETM 301
                Y  + T+  +      +    Q  +P+     E ++                + +
Sbjct: 255 CHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDPLAVDVI 314

Query: 302 PQVDRLVASLIAVI----DPQAIVFGGQLPRALGQMMIERTHMPSQREHRYGVGPKEAKL 357
            Q+ R + + IA++    +P+ I+ GG + +A  + ++  +     RE    V  ++ KL
Sbjct: 315 QQLGRYLGAAIAIVINLFNPEKILIGGVINQA--KSILYPSIEQCIREQSLPVYHQDLKL 372

Query: 358 VLSETVGDPSAIGAALL 374
           V S      +  GAAL+
Sbjct: 373 VESRFYKQATMPGAALI 389