Pairwise Alignments

Query, 331 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 305 a.a., ABC-type sugar transport systems, permease components from Pseudomonas stutzeri RCH2

 Score =  107 bits (266), Expect = 5e-28
 Identities = 89/330 (26%), Positives = 153/330 (46%), Gaps = 38/330 (11%)

Query: 9   LSDRALDAVMAIAEVPLNFIERLIGKRRMPYIFLMPNLVLFGIFTFLPIAIAVG-YAFTG 67
           +S  AL A  A A  PL+ ++R +     P + L P++++          + VG YA+ G
Sbjct: 1   MSSIALQARPAKAS-PLDALQRWL-----PKLVLAPSMLI----------VLVGFYAYIG 44

Query: 68  GTELL-------ISDRPFVGLENFGKLLDCQSYMDPGSCRESLFWTAIWNTLWFVAFNVV 120
            T LL       +    +VGL+ + +L D              +W A  N L F    + 
Sbjct: 45  WTFLLSFTNSRFMPSYKWVGLQQYERLWD-----------NDRWWVASQNLLVFGGLFIA 93

Query: 121 ATLLVALITALILNRAIAARGFFRAMFFYPVLLSPVVIGLIWKWFLDRNGLLNAFFQMLG 180
            +L++ ++ A++L++ I   G  R ++ YP+ LS +V G  W+W L+    L+   +  G
Sbjct: 94  VSLIIGVVLAVLLDQRIRREGLIRTIYLYPMALSMIVTGTAWQWLLNPGLGLDKLLRDWG 153

Query: 181 VPPEIF--LLDVGWSRFFVVVVSVWFHMGFYTLILLAGLQAIPKDLYEAAAIDAASPRRT 238
                F  L+D     + +V+ +VW   GF   + LAGL+++ + +  AA +D AS    
Sbjct: 154 WEGFRFDWLVDPDRVIYCLVIAAVWQASGFVMALFLAGLRSVDQSIIRAAQVDGASLPTI 213

Query: 239 LLRITLPLLGPNLLVVLILLMIRSVQIFDEAWVLTNGGGPGTANTFVVQYIYQMAFGSDL 298
            LRI LP L P     L++L   +++ FD    +T  GGPG ++     ++Y   F    
Sbjct: 214 YLRIVLPSLRPVFFSALMILAHIAIKSFDLVAAMT-AGGPGYSSDLPAMFMYAHTFTRGQ 272

Query: 299 RLFGLASAASVLMGLVLLALTLVQLRLGKK 328
              G ASA  +L  ++ + +  +   L  K
Sbjct: 273 MGLGAASAMLMLGAVMAIIVPYLYSELRNK 302