Pairwise Alignments

Query, 353 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (289), Expect = 1e-30
 Identities = 99/344 (28%), Positives = 158/344 (45%), Gaps = 15/344 (4%)

Query: 13  TLKDVAREANVSLSTASHAINGTAPLTTQVRERVLEAARTLGYLENRRQKATIATLRVVL 72
           T+KDVA+ A VS +T S A+     +++  R+RV EA    GY  N   +         +
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62

Query: 73  LAMTNDAAPQSDLNMVSWTMLNGFRRECERRGIRIVPYVSTTSRIDPVAVAAAADGDNVD 132
           +A+  D        ++      G        G  ++   S   +    +          D
Sbjct: 63  VAIVPDICDPYFSEII-----RGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQAD 117

Query: 133 GIVVLNDDRPQLVEALSALGRPVVLINGE-DPAMIVDTVTAENRFGARLGIEHLLSLGHR 191
           G+++L  D P  V        P +++  E  P + + TV  +N   A   + +L  LGH+
Sbjct: 118 GMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHK 177

Query: 192 NILHITWKGRTTIRR-RYDGYSDAYLAAGLAVPSDMVVEVESYEPQWGEAAIRRLLA-EE 249
            I  I+      + + R+ GY  A   AG+ + +        +  + G  A+R+LLA  E
Sbjct: 178 RIAQISGPQHAALCQFRHQGYQQALRRAGITM-NPTYCTFGDFTFEAGAKAVRQLLALPE 236

Query: 250 RPLRKATAIFCAADNLALGCLKALTEAGIRVPDDVSVLGFDDIMPAAFSAPPLSTIQLPA 309
           +P    TAIFC  D +A+G ++     G+RVP D+SV+GFDDI  A +  PPL+TI  P 
Sbjct: 237 QP----TAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPR 292

Query: 310 DRLGGAALALLEQRLVAADPTRPAHRLELGCRLVLRGSIAPPPR 353
             +G  A+ ++ + L   D  R   RL L  +LV+R S APP +
Sbjct: 293 YEIGRQAMLMMLELLRGHD-VRAGSRL-LETKLVVRESAAPPSK 334