Pairwise Alignments

Query, 353 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (280), Expect = 1e-29
 Identities = 97/340 (28%), Positives = 159/340 (46%), Gaps = 13/340 (3%)

Query: 13  TLKDVAREANVSLSTASHAINGTAPLTTQVRERVLEAARTLGYLENRRQKATIATLRVVL 72
           T+ DV + A VS +T S  +N T  +  Q RE VL A + LGY  N   +A +AT     
Sbjct: 12  TINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQA-LATNTTNS 70

Query: 73  LAMTNDAAPQSDLNMVSWTMLNGFRRECERRGIRIVPYVSTTSRIDPVAVAAAADGDNVD 132
           + +       S    + +    G     ++ G +++   S  S        A       D
Sbjct: 71  IGLVLPHFESSYFGSILFEAEQG----AQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCD 126

Query: 133 GIVVLND--DRPQLVEALSALGRPVVLINGEDPAMIVDTVTAENRFGARLGIEHLLSLGH 190
            I++ +   +  QL+E       P+V++N       + +   +    A+L ++HLL+LGH
Sbjct: 127 AILLYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGH 186

Query: 191 RNILHITWK-GRTTIRRRYDGYSDAYLAAGLAVPSDMVVEVESYEPQWGEAAIRRLLAEE 249
           R I  IT      T + RY  Y  A    G+ + S +V+E ++     G  A+++LL + 
Sbjct: 187 RQIACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDN-TLLGGYQAMQQLLQQG 245

Query: 250 RPLRKATAIFCAADNLALGCLKALTEAGIRVPDDVSVLGFDDIMPAAFSAPPLSTIQLPA 309
             +   TA+F   D++ALG ++A+ E GI VP  VS++G D+   AAF+ P LS++ LP 
Sbjct: 246 ISM---TAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPI 302

Query: 310 DRLGGAALALLEQRLVAADPTRPAHRLELGCRLVLRGSIA 349
             L   A++L  + +    P    HRL  G  +    +IA
Sbjct: 303 GELTQQAISLAVE-IANKKPQDAQHRLYQGSLIARESTIA 341