Pairwise Alignments

Query, 307 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (346), Expect = 2e-37
 Identities = 90/301 (29%), Positives = 156/301 (51%), Gaps = 15/301 (4%)

Query: 1   MKKLLMATALCIFATP----ALAETRIAVSMTSFDNPFLTILLNGIRAEAGRDKNIELLV 56
           MKKL    +  + +T     A A+  +A+ +++ +NPF   + +G  A+A ++    L+V
Sbjct: 3   MKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKA-KELGYNLIV 61

Query: 57  EDAQLDPSKQLNQVQNFIANGVDAIIVNAVDGDATAAITKAASAAKIPLVYVNHPPAELE 116
            D+Q DPSK+L+ V++    GV AI++N  D DA +   + A+ +KIP++ ++   +  E
Sbjct: 62  LDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGE 121

Query: 117 TGLPDGTAFVGSNELDSGTMEAEAACKLMGGKGKAVILMGPLENHAALVRTKDVETVFSK 176
                  + + S+ +  G M        +G   K + L G     AA  R +        
Sbjct: 122 V-----VSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKG 176

Query: 177 PECKIEILEKQTANWSRTQAQDLVSSWLTAGIQFDAVIANNDEMAIGAAQALKAAGVSMK 236
              K+++L  Q A++ RT+  +++ + L A     AV A NDEMA+GA +A++A+G   K
Sbjct: 177 S--KMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASG---K 231

Query: 237 DVVIAGIDATPDGLAAMQAGDLDITVYQNATKQGEVSVQTAVKAAAGQSTEKTLWVPFEL 296
            V+I G D T DG+AA++ G L  TV Q     G + ++TA K   G+  E  + V  ++
Sbjct: 232 SVMIVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKV 291

Query: 297 V 297
           +
Sbjct: 292 I 292