Pairwise Alignments

Query, 289 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

Subject, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score = 86.3 bits (212), Expect = 7e-22
 Identities = 81/268 (30%), Positives = 118/268 (44%), Gaps = 14/268 (5%)

Query: 11  LIGADIQLSKSPALHMREGAAHGLDYSYELVDVTARKLPQSSLPALLDELEARGFAGTNI 70
           + G  I  SKSP +H            Y     TA+ +P            A+G  G N+
Sbjct: 10  VFGNPINHSKSPFIHTLFARQTQQSMIY-----TAQCVPVDGFTEAAKHFFAQGGRGCNV 64

Query: 71  THPFKQAVIPHLHELSDDARMLGAVNTVV-FRDGRRIGHNTDWYGFYESFVRGLPDAKRD 129
           T PFK+        L++ AR+ GAVNT+    DG  +G NTD  G  +  +      K  
Sbjct: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGA 124

Query: 130 RALLVGAGGAGVAVAHAALKLDIIRLDIFDRDFPRAERLADELNARFGEGRAFAVKDPAD 189
             LL+GAGGA   V    L      + + +R F +AE+LA EL A +GE +A A +    
Sbjct: 125 TILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLA-ELVAAYGEVKAQAFEQLKQ 183

Query: 190 SLPFADGLIHATPMGMPAHPGMPVAAELIEQKHWVA-DIVYMPLVTELLATAASKGC-RT 247
           S    D +I++T   +     +P    +I     V  D++Y    T     A   GC + 
Sbjct: 184 SY---DVIINSTSASLDGE--LPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQA 238

Query: 248 LPGGGMTVFQAVGAFRLFCGREPDAKRM 275
           + G GM V QA  +F L+ G  P  K++
Sbjct: 239 IDGLGMLVGQAAESFMLWRGLRPGTKQI 266