Pairwise Alignments

Query, 633 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 290 a.a., xylose isomerase from Herbaspirillum seropedicae SmR1

 Score =  169 bits (429), Expect = 1e-46
 Identities = 99/281 (35%), Positives = 151/281 (53%), Gaps = 8/281 (2%)

Query: 7   TVSISGEFPEKLAAIAKAGFSGVEIFENDFLTYDASPREVKALAADHGLDITLFQPFRDF 66
           T+++ G    KL A   AGFS + ++  D + Y         L  + G+ +T  Q  RD+
Sbjct: 10  TITLPGGLESKLQASRAAGFSQLMLWSKDLVGYPGGLEAAVKLVRESGVRVTGIQVMRDY 69

Query: 67  EGMPEPHRARAFERAERKFDIMGELGTDLMLICSNVSQVSLGGIDRAAADFHELGELAAK 126
           EG+         + A+    I   +G  L+L+CS+ SQ + G     A D  +L  LA  
Sbjct: 70  EGLQGTLHDYKIDVAKNLLQICKAVGAPLLLVCSSTSQHASGDTAHIARDLRKLANLAVP 129

Query: 127 HGVRVGYEALAWGRHISDHRDAWEVVRRADHANVGIILDSFHTLSRKIDPNSIRSIPGDK 186
            G+RVG+EAL+WGRHI+ +  +WEVV  ADHAN+G+++DSFH L+ +     + +IPG +
Sbjct: 130 LGIRVGFEALSWGRHINQYMQSWEVVEMADHANLGVVIDSFHILANRGTLEDLDAIPGRR 189

Query: 187 IFIVQLADAPLIDM----DLLYWSRHFRNMPGEGD--LPVVDFMRAVAATGYSGPLSLEI 240
           I +VQL+D    ++    + L  +RH R  PGEG+    + D +R +   GY G  S E+
Sbjct: 190 IVMVQLSDFMWREIRSPEERLETARHLRVFPGEGEHSAELSDMVRRLHRGGYRGDYSFEV 249

Query: 241 FNDQFRGGSARLLAEDGHRSLINLMDQVRRLEPDIRIDVPA 281
           FND +   S  ++AE   RS   + DQV  L   +R+  PA
Sbjct: 250 FNDDYLQMSPAVVAERARRSAKWVTDQV--LRRGLRVREPA 288