Pairwise Alignments

Query, 287 a.a., branched chain amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  153 bits (386), Expect = 9e-42
 Identities = 96/290 (33%), Positives = 158/290 (54%), Gaps = 19/290 (6%)

Query: 12  LAYGMVLFIISIGLSVTMGLMRVVNLAHGAFAMIGGY--------LASYAAHGLGLGYAM 63
           L+ G VL + +IGL++T G+M ++N+AHG   M+G Y        + +   H      A+
Sbjct: 249 LSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLAI 308

Query: 64  AILVAIVGTIVIAIPLERFLYRRIYGAPELTQVLMTIGITFCIIGIANYVFGPTLKTIPL 123
           A+ +A + T  + + LER + R +YG P L  +L T GI+  +      +FGPT + +  
Sbjct: 309 ALPLAFLVTGAVGLALERGVIRFLYGRP-LETLLATWGISLILQQTVRTIFGPTNREVGN 367

Query: 124 PQQLAGPTDLGFRTIATHRIFAIACGLAVAGALWFTFEKTAFGIKLRAAVDNAAMAAALG 183
           P  ++G  +LG   I  +R++ I   LAV  AL F  +KT  G+++RA   N  MA+++G
Sbjct: 368 PSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMG 427

Query: 184 VRTEIIYAVSFAIAVGLAAMGGVIGAELLPVEPYYALRYMVTFLVVVSVGGAGSIPGALI 243
           +RT  + A++FA+  G+A + GV  +++  V P     Y++   +VV  GG G++ G L+
Sbjct: 428 IRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLV 487

Query: 244 ACLLLGAIDTTGRYLAPEYGEFFFYLAVIVIITLF----PRGLL---GRA 286
               LG ++   ++L P  G     + V+V+I LF    PRGL    GRA
Sbjct: 488 GAFSLGILN---KFLEPYAGAVLGKILVLVLIILFIQKRPRGLFALKGRA 534