Pairwise Alignments

Query, 335 a.a., branched chain amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 400 a.a., D-lactate transporter, permease component 1 (from data) from Phaeobacter inhibens DSM 17395

 Score =  116 bits (291), Expect = 8e-31
 Identities = 97/350 (27%), Positives = 161/350 (46%), Gaps = 65/350 (18%)

Query: 41  FPDNLALLTRIIAIALLVLSIDLVTGYCGVATLGHAALFGAGAYAAG--IAAAHFEITDP 98
           +PD   L+ R +   +  +  +++ G  G  + GHAA  G G+Y+A          +   
Sbjct: 42  YPD---LMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYSAVWMFKLLSMNVVPA 98

Query: 99  LLMTVIGAAGGGVAGLLSGTVLLRAHGLPQLVLSIAVIHL-FHEAANKASGWTGGSDGLS 157
           ++++VI A   G+  L+ G V LR  G+   +L++A   + F+ A +  +  T G  GL 
Sbjct: 99  IVLSVIVA---GLFALVIGYVSLRRSGIYFSILTLAFAQMSFNLAYSVLTPITNGETGLQ 155

Query: 158 ---------GVSPDA--------LFG-----TFEFDL------FGRTAYVYGVCLLLLVF 189
                    GVS  A        LFG     TFE  +      F    Y+  + LL   +
Sbjct: 156 LTLDDPRVLGVSATADGSIPVTSLFGLEMRSTFEMVVGPWAFQFNAGYYLCALILLAAFY 215

Query: 190 IALRVVVNSPFGMLCRGVKQDSIRIQAMGGSVNGTVLKMFVISGIVAGIGGALNAISTQV 249
           +++R+   SPFG++ + VK +  R+   G +     L  FVISG+ AG+ G L A    +
Sbjct: 216 LSIRIF-RSPFGLMLKAVKSNQQRMNYTGLNTRPYTLAAFVISGMYAGLAGGLMASMDPL 274

Query: 250 VGLDSLSFTLSAEGLVMLVLGGAGSLYGALIGTVTFMWFEDVVSAAN------------- 296
            G + + +T S E ++M +LGGAG+L G ++G     +FE++ S  N             
Sbjct: 275 AGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFENIFSKINDNVLHSWFSFMPD 334

Query: 297 -----------PF---HWLTIVGLLLIAVVLFAPRGLYGAGEQIIGRLRG 332
                      PF    W   +G+L + VV+F P GL   G+++ G ++G
Sbjct: 335 GIEDAMVFIVHPFIGKGWHLTLGILFMLVVIFLPGGLVEGGQKLRGWIQG 384