Pairwise Alignments

Query, 270 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 269 a.a., 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) from Klebsiella michiganensis M5al

 Score =  249 bits (636), Expect = 4e-71
 Identities = 134/268 (50%), Positives = 166/268 (61%), Gaps = 3/268 (1%)

Query: 3   SLLRKPVATSGKVHDITPQSADWGYVGFGLYRLKPGETATENTGDTEVILVLVEGKATIS 62
           SLL K     G++  ITPQSA W Y+GF ++ LK G+T T  +GD E+ LVLV G A++ 
Sbjct: 2   SLLAK-AKKEGQIQHITPQSAGWKYIGFDVWMLKKGQTVTLESGDRELCLVLVAGLASVK 60

Query: 63  AGGKDFGELGDRMNVFERKPPHCVYVPAGSEWSLTATTDCTVGVCTAPGEKGSREAQQIG 122
               DF  LG RM+ FER PP  VYVP   +  +TA +D  + VC+APG KG+  A+ I 
Sbjct: 61  TTRADFPNLGQRMSPFERTPPWSVYVPPQDKVEVTADSDLELAVCSAPG-KGTLPARVIS 119

Query: 123 PNGVQLTERGKGANTRYIFPIAMEERDVADSLLVTEVFTPSGNWSSYPPHRHDEDNYPDM 182
           P  V +  RGKG N R +  I  +    AD LLV EV+T  G  SS+P H+HD       
Sbjct: 120 PQDVGVEHRGKGRNQRLVHNILPDSAQ-ADCLLVVEVYTEEGATSSWPSHKHDTALPGQE 178

Query: 183 TYLEETYYHRLNPAQGFGFQRVFTEDGSLDETMAVSDGDVVLVPKGHHPCGAPYGYEMYY 242
           T LEETYYHR +P QGF FQRV+T+D SLD  MA  + DVV+VP+G+HP  A  GY+ YY
Sbjct: 179 TQLEETYYHRFDPPQGFAFQRVYTDDRSLDACMAPYNHDVVMVPRGYHPVAAIAGYDSYY 238

Query: 243 LNVMAGPMRKWRFKNHPDHDWIFRRDNP 270
           LNVMAGP RKW F    DH WI   D P
Sbjct: 239 LNVMAGPDRKWMFTWEEDHAWINSPDYP 266