Pairwise Alignments

Query, 349 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 318 a.a., high-affinity nickel-transporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  129 bits (325), Expect = 8e-35
 Identities = 99/312 (31%), Positives = 145/312 (46%), Gaps = 19/312 (6%)

Query: 40  GGPFAPLMQWINVHQQMFYRALTGALKAMRE-DSWALGSLIGLSFAYGVFHAAGPGHGKA 98
           GG    + +W    Q+    AL G L+A+R  ++ AL   +G+ FAYG FHAAGPGHGK 
Sbjct: 22  GGGGDGIARWAASQQREVQDALAGQLRALRVGEAGALAGFLGVCFAYGFFHAAGPGHGKV 81

Query: 99  VISSYMIANETQLRRGILISFVSALIQGLMAIGLVG-AAWLVLRGTSITMTKATQAMEIA 157
           VI  Y +A    + R   ++ +++L Q   AI LVG  AW+    T+     A      A
Sbjct: 82  VIGGYGVARRISMLRLSGVALIASLGQAATAIVLVGVGAWVFQASTAQLTGVADDWFAPA 141

Query: 158 SFAMVALFGAWLLVRKLWSLRIRREPVPVFATAGEAPAARTNGMGTGLRFQGKPVFADHD 217
           S A + + G WL+ R +  LR  R                 +         G     DHD
Sbjct: 142 SAAAILVLGLWLVWRGVARLRAARR-------------VEAHHHDHHDHHHGHDHDHDHD 188

Query: 218 H-NGTGD-LCTACGKSHAPDPMLLKGKNFSLHEAWSAIIAVGLRPCSGAIIVMSFALLNG 275
           H +G GD  C  CG +HAPD   +        E  + I AV +RPC+GA+ V+   L   
Sbjct: 189 HDHGHGDGACETCGHAHAPDASAVLAAR-GPREILALIGAVAIRPCTGALFVLILGLRLQ 247

Query: 276 LYLGGVLSVLAMSLGTAITVSALAIMAVSAKGLAVRFAGPGSRKAAGISHAIEIAGALFV 335
           +    V  V+AM+LGTA    A+A+ A   +  +   +G G  +A  +   +EI   + V
Sbjct: 248 IEAAAVAGVVAMALGTASVTVAVAVAATGLRESSALASG-GWSQARHLGSVLEIGAGVLV 306

Query: 336 LIMGLLLLGASL 347
            ++   LL A +
Sbjct: 307 ALLAWGLLQAGM 318