Pairwise Alignments

Query, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 243 a.a., amino acid ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  187 bits (474), Expect = 3e-52
 Identities = 97/221 (43%), Positives = 144/221 (65%), Gaps = 5/221 (2%)

Query: 23  LAGIDYTVPKGSITCIIGRSGAGKSTLIRLANGLEKPSTGRVVVDGVDVAALDEK-SLRT 81
           L G+D  V KG +  I+G SG+GKSTL+R  NGLEK + G +  +G D+   D+K ++  
Sbjct: 17  LKGVDLKVAKGEVLVIVGPSGSGKSTLLRCINGLEKTTEGHIFFEGDDIT--DKKVNINK 74

Query: 82  LRRSVGMIFQHFNLLSSRTAFDNVAL-PLEIAGLGKKEIEARVAPLLDLVGLSDKAKRYP 140
           +R+ +GM+FQ FNL    T  DN+   P ++  + KKE E     LL  VGL  K  +YP
Sbjct: 75  IRQKIGMVFQQFNLFPHLTVLDNITFAPRKVLNVSKKEAEELARELLKKVGLEGKENQYP 134

Query: 141 AELSGGQKQRVGIARALATQPKLLLSDEATSALDPETTQSILELLKRINAELGLTVLLIT 200
            +LSGGQ+QRV IARALA +P  +L DE TSALDPE  + +L+++K++  E G+T++++T
Sbjct: 135 IQLSGGQQQRVAIARALAMKPDAMLFDEPTSALDPELVKEVLDVMKQLAYE-GMTMVVVT 193

Query: 201 HEMEVVKTIASQVAVIDRGLIVEEGTTFDIFTAPKHETTRS 241
           HEM   K +  ++  ID G I+E+G   D+F+ PK+E T++
Sbjct: 194 HEMGFAKEVGDRLIFIDDGQILEDGNPSDVFSNPKNERTKN 234