Pairwise Alignments

Query, 527 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 511 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  237 bits (604), Expect = 9e-67
 Identities = 148/494 (29%), Positives = 243/494 (49%), Gaps = 12/494 (2%)

Query: 35  FMSILDIQIVSASLAEIQAGLGAGSDEIAWVQTSYLIAEVIMIPLSGTLARILSTRVLFA 94
           F++ILD  I + S++ I   LG  + +  +V TSY +AE I +PL+G LA    +  +F 
Sbjct: 29  FLAILDTTIANVSVSNIAGSLGTSTSQGTYVITSYAVAEAISVPLTGWLASRFGSIRVFV 88

Query: 95  TCAAGFTLSSALCATATNIDQMIVYRAIQGFIGGGMIPSVFAAAFTIFPPSKRSVVSPII 154
           TC   F + S LC  A ++  ++++R + GF+GG ++P        IFP +K      I 
Sbjct: 89  TCFLLFGVFSLLCGLANSMSTLVMFRVLLGFVGGPLMPLSQTLMIRIFPKNKSHAAIGIW 148

Query: 155 GLVATLAPTIGPTVGGYLSNAFSWHWLFLVNIIPGIIVTILTWSLIDFDKPETSLWKKFD 214
            +   +AP +GP +GG L +  SW ++F + +   I   +L W L+   + +T+   K D
Sbjct: 149 SMTTLVAPIMGPILGGVLCDQLSWPYIFFIKMPFAIAAALLCWKLLKKFETKTT-HSKID 207

Query: 215 WWGLISMAVFLGSLEYVLEEGNNKDWFNDEHIVIGSVAMVIGAVVFFWRAFKVDFPVVDI 274
             GL  + V++ +L+ +L+EG + DWF    IV  +V  VIG + F         PVVD+
Sbjct: 208 KVGLALLVVWVAALQLMLDEGKDHDWFESSRIVFLAVIAVIGFIAFLIWELTERNPVVDL 267

Query: 275 RAFADRNFSIGSLFSFVMGIG-LYGLTYLYPLYLGRVRGYDALMIGETMFVSGLAMFFTA 333
           + F  R +SI S+ +  +  G  + ++ + PL+L    GY A + G      G+   F A
Sbjct: 268 KVFRHRGYSI-SMVTLSLAFGAFFSISVVTPLWLQIYMGYTATISGHATASMGILAVFLA 326

Query: 334 PIAGKVSTKLDPRVMMAIGFISFGCGTWIMTYVTTDWDFYELLIPQILRGFGLMMCMVPI 393
           PI   +S+K DPR  +  G +  G  T++  + T D  F ++  P   +G G+ +  VP+
Sbjct: 327 PIVANLSSKFDPRPFVFAGVMWLGLWTFMRGFNTVDMTFSQISWPLFFQGIGMPLFFVPL 386

Query: 394 NNIALGTLPPARIRNASGLFNLTRNLGGAVGLAVINTLLSQRTDDHYVRLAEHVSYSNPQ 453
             IALG++ P  + +A+GL N  R L GA   ++INT     T   +  LA     +   
Sbjct: 387 TAIALGSVKPHEMESAAGLMNFIRTLSGAFATSMINTSWEHETRYVHAELAGLTDKAG-V 445

Query: 454 ALEWLNNVGANYDSYGLDGASVAIKKLVGMVSQQAWMLAFADVFFALTLLFGSLIFMTVL 513
           A + + N G +        A      +  ++  Q+ M+A   +F  + L+F     M   
Sbjct: 446 ATQAMQNSGMS--------AEQTRSAMDWILQNQSVMVATNQLFIVIALIFVFAACMIWF 497

Query: 514 IQKPKAAPPPDAAH 527
             KPK A    A H
Sbjct: 498 APKPKQAVDTSAVH 511