Pairwise Alignments

Query, 432 a.a., multidrug resistance efflux pump from Agrobacterium fabrum C58

Subject, 361 a.a., multidrug transporter EmrA from Klebsiella michiganensis M5al

 Score =  182 bits (463), Expect = 1e-50
 Identities = 112/308 (36%), Positives = 169/308 (54%), Gaps = 5/308 (1%)

Query: 111 TDDAYIQGDIAVIAPKVAGYVAKVNVVENQEVKAGDPLVTLDDGDYRIAFEQADAQIRTE 170
           TD+AY++G    I+P+V GY+ +V V +  +VKAGD L  +D+  Y+    QA A +  +
Sbjct: 52  TDNAYVRGQTTFISPQVNGYITEVKVQDFNQVKAGDVLFQIDERIYKQRVHQAQATLAMK 111

Query: 171 QLSLKRIDAQIIGGEA--AQEQAVAQKGALDAALRGAEITQKRATELQAKDVGTVAASDN 228
           + +LK    Q    EA  A+ +A  Q          A++  KR  EL A    ++   D+
Sbjct: 112 EAALKNNQQQRRSAEAVIARNEAALQNARAQNLKTQADL--KRVQELTADGSLSIRERDS 169

Query: 229 AQVALDQARANVVAGEAAISSAKANVELLRAQREEAESTIRSLQLSKDKAARDLAFTVLK 288
           A+ +  Q  A++   +A +  ++ +++     R+   + + S + + + A  DL  T + 
Sbjct: 170 ARASAAQGTADIEQAKATLEMSRQDLQSTIVNRDSLLADVASAKAALELAQIDLQNTRII 229

Query: 289 APYDGVIGNLAVQTGDLVSVGKRLASLVPMNELYIDANFKETQLARVVPGSKVRVHVDAF 348
           AP DG +G ++V+ G  V+ G  L SLVP     I AN KETQLA+V  G +V   VDA 
Sbjct: 230 APTDGQLGQISVRLGAYVTAGTHLTSLVPPQHWLI-ANLKETQLAQVRVGQRVTFTVDAL 288

Query: 349 DDEAIEGTVQSISPGSGSVFSMLPPENATGNFTKVIQRVPVRIVFSKEDLAKHNLRAGLS 408
           + E   GTVQSISP +G  FS + P+NATGNF K+ QR+PVRI   +       LR G+S
Sbjct: 289 NSEKFTGTVQSISPATGVEFSAISPDNATGNFVKIAQRIPVRIAVDEGQKNGQRLRPGMS 348

Query: 409 VVVDVDTR 416
           V V +DTR
Sbjct: 349 VQVTIDTR 356