Pairwise Alignments

Query, 253 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 255 a.a., Integral membrane protein TerC from Pseudomonas fluorescens FW300-N2E2

 Score =  238 bits (606), Expect = 1e-67
 Identities = 113/240 (47%), Positives = 171/240 (71%), Gaps = 1/240 (0%)

Query: 8   LSDPAAWVALVTLIVMEVVLGIDNLIFISILTNKLPPEQREKARKIGIGLALIMRLGLLG 67
           L++P  WVA  TL  +E+VLGIDN+I ISIL +++P   + + R  G+ LA++ R+ LL 
Sbjct: 4   LTNPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQARTRIFGLALAMVTRILLLL 63

Query: 68  TVAWIVQLTTPVFEIFGHAFSWKDMILIAGGLFLMWKATKEIHHNVDPEDHKEDMVGGPV 127
           ++ W+++LT  +FE+FG   S +D+IL  GGLFL+WK+++E++H ++ ED   +   G  
Sbjct: 64  SITWVMRLTADLFEVFGQGISGRDLILFFGGLFLLWKSSQEMYHALEGEDETNEAPSGKG 123

Query: 128 AMNFGAAIGQILLLDLVFSVDSIITAVGMTPHLPIMIVAVVFAVAVMLLAATPLANFIER 187
             NF   I QI ++D+VFS+DS+ITAVGM  H+P+M+ A++ AV VM+LA+  ++ FI++
Sbjct: 124 G-NFIYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVAAIIVAVLVMMLASATISEFIDK 182

Query: 188 NPTIVMLALAFLMMIGTTLIAEGMGFHVPKGYVYAAMAFSALVELLNMLARNARQRKKAQ 247
           +P++ MLAL+FL+++GT LIAE    HVPKGYVY AMAFS  VE +N+  R A  RK+ Q
Sbjct: 183 HPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAINIKMRTAIARKRKQ 242