Pairwise Alignments

Query, 332 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 373 a.a., glucose/maltose/trehalose/sucrose ABC transporter, ATPase component (from data) from Dinoroseobacter shibae DFL-12

 Score =  330 bits (846), Expect = 3e-95
 Identities = 182/356 (51%), Positives = 231/356 (64%), Gaps = 29/356 (8%)

Query: 1   MGSISLQNVSKLFGEAKVIPSIDLDINDGEFVVFVGPSGCGKSTLLRLIAGLEDVSGGKI 60
           M  + L  V K +G+ KV+ +I+LDI  GE +VFVGPSGCGKSTLLR+IAGLE ++GG +
Sbjct: 1   MADLKLTGVEKAYGDVKVLSNINLDIQQGELIVFVGPSGCGKSTLLRMIAGLEKITGGTL 60

Query: 61  VIDGNDATEKAPAERGLAMVFQSYALYPHMSVRNNIAFPLKMAKLDKAVIDKKVEDAARI 120
            IDG    +  PA+RG+AMVFQSYALYPHM+VR N++F LK+AK  +A ID  VE AA  
Sbjct: 61  EIDGTVVNDVPPAQRGIAMVFQSYALYPHMTVRENMSFALKIAKKSQAEIDAAVEAAAEK 120

Query: 121 LNLTDYLERRPSQLSGGQRQRVAIGRAIVREPKAFLFDEPLSNLDAALRGTMRLEISELH 180
           L L  YL+R P  LSGGQRQRVAIGR+IVR+PK +LFDEPLSNLDAALR   RLEI++L 
Sbjct: 121 LQLGQYLDRLPKALSGGQRQRVAIGRSIVRDPKVYLFDEPLSNLDAALRVATRLEIAQLK 180

Query: 181 NTL-KTTMIYVTHDQVEAMTMADKIVVLNRGNIEQVGSPMQLYKTPRNLFVAGFIGSPRM 239
             + ++TM+YVTHDQVEAMT+A +IVVL  G I QVGSP++LY+ P N FVA FIGSP+M
Sbjct: 181 EAMPESTMVYVTHDQVEAMTLATRIVVLAGGGIAQVGSPLELYEKPENEFVAQFIGSPKM 240

Query: 240 NLITG-------------------------DFARQKGATTAGVRPEHLVLSKESG--LWQ 272
           NL+ G                         D +    A   GVRPE +V +   G  +++
Sbjct: 241 NLLPGKIIGTGAQTTVEMTDGGRAVSDYPSDDSLMGAAVNVGVRPEDMVEAAPGGDYVFE 300

Query: 273 GKVTVAEHLGSDTFLHLEV-SGIGPITARTDGEFECKHGDTVFITPDDTKIHRFDD 327
           GKV + E LG  T L+ E  SG  P   +  G  +   G    +T +  K+H F D
Sbjct: 301 GKVAITEALGEVTLLYFEAPSGEDPTIGKLQGIHKDLKGQVTRLTAEPAKVHVFKD 356