Pairwise Alignments

Query, 332 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 338 a.a., ABC transporter for Xylitol, ATPase component (from data) from Dinoroseobacter shibae DFL-12

 Score =  352 bits (903), Expect = e-102
 Identities = 188/338 (55%), Positives = 230/338 (68%), Gaps = 6/338 (1%)

Query: 1   MGSISLQNVSKLFGEAKVIPSIDLDINDGEFVVFVGPSGCGKSTLLRLIAGLEDVSGGKI 60
           M  I +  ++K +G  + +  I+LDI DGEFVVFVGPSGCGKSTLLR +AGLE VS G+I
Sbjct: 1   MAGIKIDKINKFYGTTQALFDINLDIEDGEFVVFVGPSGCGKSTLLRTLAGLEGVSSGRI 60

Query: 61  VIDGNDATEKAPAERGLAMVFQSYALYPHMSVRNNIAFPLKMAKLDKAVIDKKVEDAARI 120
            I G D T   PA+R LAMVFQSYALYPHM+VR N+ F +K+   +  +  +++ +AAR+
Sbjct: 61  EIGGRDVTTVEPADRDLAMVFQSYALYPHMTVRENMEFGMKVNGFEPDLRKERIAEAARV 120

Query: 121 LNLTDYLERRPSQLSGGQRQRVAIGRAIVREPKAFLFDEPLSNLDAALRGTMRLEISELH 180
           L L DYL+R+P QLSGGQRQRVAIGRAIV+ P  FLFDEPLSNLDA LR  MR+E+  LH
Sbjct: 121 LQLEDYLDRKPGQLSGGQRQRVAIGRAIVKNPSVFLFDEPLSNLDAKLRVQMRVELEGLH 180

Query: 181 NTLKTTMIYVTHDQVEAMTMADKIVVLNRGNIEQVGSPMQLYKTPRNLFVAGFIGSPRMN 240
             L  TMIYVTHDQVEAMTMADKIVVLNRG IEQVGSPM LY  P + FVA FIGSP MN
Sbjct: 181 KQLGATMIYVTHDQVEAMTMADKIVVLNRGRIEQVGSPMDLYHKPNSRFVAEFIGSPAMN 240

Query: 241 LITGDFARQ-----KGATTAGVRPEHL-VLSKESGLWQGKVTVAEHLGSDTFLHLEVSGI 294
           + + D   Q       A   G RPEH+ ++    G     V V E LG ++ L+L + G 
Sbjct: 241 VFSSDVGLQDISLDASAAFVGCRPEHIEIVPDGDGHIAATVHVKERLGGESLLYLGLKGG 300

Query: 295 GPITARTDGEFECKHGDTVFITPDDTKIHRFDDKGIAI 332
           G I AR  G+ E K G  V +     ++H+FD+ G AI
Sbjct: 301 GQIVARVGGDDETKVGAAVSLRFSRHRLHQFDEAGRAI 338