Pairwise Alignments

Query, 338 a.a., sorbitol/mannitol ABC transporter permease from Agrobacterium fabrum C58

Subject, 292 a.a., permease protein of sugar ABC transporter from Synechococcus elongatus PCC 7942

 Score =  114 bits (284), Expect = 4e-30
 Identities = 80/271 (29%), Positives = 130/271 (47%), Gaps = 8/271 (2%)

Query: 59  RVMLAPSVLLLLVWMIVPLAMTLWFSFQNYNLLNPANVSFAGLFNYQYFYTDPAFFQSIW 118
           R +  P++L +      PL    W S Q  NL       F GL NYQ  + D  F+  ++
Sbjct: 6   RWLTIPALLTITGVFAYPLLRAAWLSLQALNLNTQLQPVFIGLANYQRLWGDSRFWGDLF 65

Query: 119 NTLLIVGGVLVITVVGGIAIALLLDNDIFGQGIVRIMIISPFFVMPPVAALVWKNMIMHP 178
           NT +     + + +V G+AIALLL      +G +R + + P+ +   V AL W  +   P
Sbjct: 66  NTTVFTVTSVSLELVLGLAIALLLHQPSRWRGPLRTIALLPWVLPTAVMALGWAWIFNDP 125

Query: 179 GYGVLADLSRFFG--LQPVDWFA--QFPLLSIIIIVAWQWLPFATLILLTALQSLDGEQK 234
            YGV  D  +  G    P++W    ++  L+++    W+  PF  ++LL   Q++  +  
Sbjct: 126 -YGVWNDWLQQLGWIAAPINWLGNPRWAWLTLVAADVWKTTPFVAILLLAGRQAIPEDLY 184

Query: 235 EAAEMDGANFINRFIYLTLPHLARAITVVILIQTIFLLGVYAEILVTTNGGPGYASTNLA 294
           EA  ++GA     F  +TLP L   + + +L ++    G++  + V T GGP  ++  LA
Sbjct: 185 EAHCLEGATAWQSFWQITLPLLRPQLAIALLFRSAQAFGLFDLVKVMTGGGPANSTETLA 244

Query: 295 FLIYRTALLGYDVGGASAGGIIAVVLANIVA 325
              Y TAL   D G    G  +A+V A I+A
Sbjct: 245 LYAYTTALRYLDFG---YGATLAIVTAAILA 272