Pairwise Alignments

Query, 338 a.a., sorbitol/mannitol ABC transporter permease from Agrobacterium fabrum C58

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  104 bits (259), Expect = 3e-27
 Identities = 78/287 (27%), Positives = 140/287 (48%), Gaps = 14/287 (4%)

Query: 60  VMLAPSVLLLLVWMIVPLAMTLWFSFQNYNLLNPANVSFAGLFNYQYFYTDPAFFQSIWN 119
           + +AP++ L+ ++M+ P+A +LW SFQ+   +    + FAG  N    + DP F +++ N
Sbjct: 18  LFVAPALGLITLFMVYPIAWSLWMSFQSGRGMT---LKFAGFANIVRLWNDPVFIKALTN 74

Query: 120 TLLIVGGVLVITVVGGIAIALLLDND-IFGQGIVRIMIISPFFVMPPVAALVWKNMIMHP 178
           T+      + I ++  + +A LL+N  + G+G+ R  I  P        ++++K M    
Sbjct: 75  TMTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVAYSVLFKGMFATD 134

Query: 179 GYGVLADLSRFFGL--QPVDWFAQ--FPLLSIIIIVAWQWLPFATLILLTALQSLDGEQK 234
           G  ++    +  GL   P+ W     +  + +I+ + W+W  +  +  L ALQ++D    
Sbjct: 135 G--IVNSTLQAIGLAASPIPWLTHPFWAKVLVILAITWRWTGYNMIFYLAALQNIDKSIY 192

Query: 235 EAAEMDGANFINRFIYLTLPHLARAITVVILIQTIFLLGVYAEI--LVTTNGGPGYASTN 292
           E A +DG     R  +LT+P L   I    +I TI  L ++ E+  L    GGP  A+  
Sbjct: 193 EVARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEGKGGPSNATLT 252

Query: 293 LAFLIYR-TALLGYDVGGASAGGIIAVVLANIVAIFLMRAVGKNLDR 338
           L+  IY  T     ++G A+    + VVL  ++A F+     +  DR
Sbjct: 253 LSLYIYNLTFRFMPNLGYAATVSYVIVVLVALLA-FVQFFAARERDR 298