Pairwise Alignments

Query, 437 a.a., sorbitol ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 481 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  107 bits (266), Expect = 1e-27
 Identities = 100/406 (24%), Positives = 171/406 (42%), Gaps = 37/406 (9%)

Query: 52  IKVEWVTLEENVLRERVTTDIATNGGQYDIMTIGNYEVPIWAKQGWLLPLE-------KL 104
           I+V +    E+V  ++VT  +++   +YD    G Y    +   GW+  L        K 
Sbjct: 88  IEVTYDVFPEDVYFDKVTAALSSGSSEYDAFMTGAYMTWTYGPAGWITDLNEWIKDPAKT 147

Query: 105 GEKYDVDDILPAIR----------GGLSAE-GKLYAAPFYGESAMIMYRKDLFEKAGLKM 153
             +Y  DD LP ++          G L +E  K +  P+  E   + Y +++FEK G  +
Sbjct: 148 NPQYGWDDFLPGVKASCAWNGQPGGALGSEDAKQWCIPWGYEQNNLSYNQEMFEKVGASV 207

Query: 154 PDNPTWEFIGDAARKITDRKTDINGMCLRGKAGWGE-NMAFISALTNSFGGRWF----DE 208
           P N   E +  AA+   D    + G+ +RG   W   +  F+S   N FG +      D 
Sbjct: 208 PKNLD-ELVATAAKLNKDVGGGVYGIGVRGSRSWATIHPGFLSGYAN-FGQKDLNVSEDG 265

Query: 209 NWKPQFDQPEWKSALQFYVDLMKDAGPSGASSNGFNENLTLFQQGKCGMWIDATVAASFV 268
                 +  E K+    +V +++++GP   S+  + +  T    G   M  DA +   F+
Sbjct: 266 KLSAAMNTAESKAFHAKWVQMIQESGPKDWSTYTWYQVGTDLGAGASAMIYDADILGYFM 325

Query: 269 SNPKDSTVADKVGYALFPTHGELKNHGNWLWSWNLAIPKSSQKADAAEKFISWATSKEYT 328
            N  D+ +A K+ YA F  + E K     +W W+LA+   ++  DA   F+ WA+  E+ 
Sbjct: 326 -NGGDNKMAGKLAYAPFAANPEAKAPTPNIWIWSLAMSNFAKDKDATWYFLQWASGLEHA 384

Query: 329 QLVAAKEGWANVPPGTRTSLYKNADYEKAAAFAKPTLAAMDAADITKPTVKPVPYTGGQF 388
              A K  + N     R S++K+  + +    + P    M   D++ P  K        F
Sbjct: 385 IFGATKMDFVN---PVRASVWKDEIFRERLNKSYPGYVEMH--DVSAPGAKI------HF 433

Query: 389 VAIPEFQALGTTVGQLFSAVVAGQSSVEDALASAQSTATREMTRAG 434
              P F  L T        +VA +  V++ L     +  R++  AG
Sbjct: 434 TPQPLFFDLTTEWAATLQKMVAKEVPVDEGLDRLVESINRQLAEAG 479