Pairwise Alignments

Query, 465 a.a., amidase from Agrobacterium fabrum C58

Subject, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis JJ

 Score =  117 bits (294), Expect = 6e-31
 Identities = 118/449 (26%), Positives = 191/449 (42%), Gaps = 50/449 (11%)

Query: 24  SEYWQAVE-TRIEAFEPVVNALYAYDPEDARRQAAASTQRWQRGETLGPLDGLPVSLKEL 82
           S+Y + +E + + AF  V       + E+  +  A   +         PL G  V++K  
Sbjct: 7   SDYLEKIEKSDVNAFIDVNGEKVLKEAEELEKNDALKNK---------PLYGKIVAVKSN 57

Query: 83  IATKGHPVPLGTKAVELVPALEDAPVAARCREDGAILYAKTTCPDYGMLSSGLSSFHKLS 142
           I  KG+ +   +K +E      DA V  + R  GA++   T   ++   SSG +S +  +
Sbjct: 58  INVKGYKISCASKTLEKYVGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPT 117

Query: 143 RNPWDPTQNPGGSSAGAASAGAAGYGTLHIGTDIGGSVRLPAGWTGLFGFKPSQGRIP-- 200
           +NP    + PGGSS+G+A+A AA    + IG+D GGS+R PA   G+ GFKPS G +   
Sbjct: 118 KNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQ 177

Query: 201 --VDPYYTGRCAGPMTRTVTDAAYAMATLSRPDWRDGTSLPPNAIDWMDLDIDVTGLKIG 258
              D   +    GP+T+   DA      +   D  D TSL     +      D++  KIG
Sbjct: 178 GLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTSLETPKFE----KKDISNYKIG 233

Query: 259 LM---LDAGCGLPLDEEVRDAVVAAAKLFEQAGAFIIP-----VEPVLTRDMLDGLDDFW 310
           ++   +D       DE++R+ +    ++F+  G  I+      ++  L    L    +F+
Sbjct: 234 VVKEFMDV-----TDEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLALPTYYLINYVEFF 288

Query: 311 RA------KFWGDMVALSAD----RRAAILPYILEWAEKGANVSGARAVFGFNQTMEMRK 360
            A      + +G+ +  +      RR  I  +I E        SG            M+K
Sbjct: 289 SATRKYDGRRYGEFIEEACGEEVLRRILIGKHISE-----QEFSGKYYKKALQARKSMKK 343

Query: 361 ACGRLMQSVDAVISPVNPIASYPADWASPTNDPARPFEHIAFTVPWNMSEQPASSINCGF 420
               L  S D ++ P  P   +          P   + +   TVP N+    +  + CG 
Sbjct: 344 EMLGLFNSADLIVGPTVPKLPHK---LGEDVSPMEMYAYDVLTVPTNICGICSGVVRCG- 399

Query: 421 SKSGMPIGLQIIGPRYEDLFVLRLSKAFE 449
           +  G+P+GLQI G   ED  VL     FE
Sbjct: 400 NIQGVPVGLQIQGAPLEDEKVLSAMIEFE 428