Pairwise Alignments

Query, 511 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  158 bits (399), Expect = 5e-43
 Identities = 142/527 (26%), Positives = 233/527 (44%), Gaps = 57/527 (10%)

Query: 11  KLSRRTAL--TLALGTALWLPLSVVNAEAAPKT----ALTLGMTVEPTGLDPTIAAPVAI 64
           K +RR  L  ++AL TA  +P+  V + AA +     ++++ +  EP  L   IA     
Sbjct: 10  KPTRRAFLLSSVALATATAMPVLPVPSFAAEEPTRGGSVSINIGTEPPVL-VLIAHSAGA 68

Query: 65  GQVTWQNIFEGLVTIDSKGKVKPQLAESWEISPDGKSYTFKLRKGVTFHDGEAFDSAVAK 124
                    E L++ D     +P LA  W +S DG  Y FKLR+ V +HDG  F +    
Sbjct: 69  AYYISGKATESLLSYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVA 128

Query: 125 FSL-----DRARGEASVNPQKRFFAAIDSIETPDADTLVLKLKQPAGSLIYWLG------ 173
           FS+     +  RG A+       FA +      ++  + L L +PA  L+          
Sbjct: 129 FSILALKENHPRGRAT-------FAHVKEANVLNSHEVELTLAKPAPYLLTAFASFEAPI 181

Query: 174 WPASVMVAPKSAE-ANRTTPVGTGPFKFVSWAKGDKVELEKNAAYWDKAVAVKLDKATFR 232
            P  +    K AE  +   PVGTGP+KFV W +G      +N  YW       LD+  FR
Sbjct: 182 VPKHLYEGTKIAENPHNVAPVGTGPYKFVEWVRGSHALFVRNEDYWGSPKPY-LDQIIFR 240

Query: 233 FVADPQAQAAALKSGDIDAFPEFGAPELMTSFDGDKRLGTFVGNTELK------VVAGMN 286
           F+ DP A  AA+++G++       A   +T  D  K     V +T+          A  N
Sbjct: 241 FIVDPAAAVAAIETGEVQVST---ANLPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFN 297

Query: 287 NARKPFNDKRVRQALMMAVDRGTVIEGAWSGYGTAIGSHYTPN-DRGYVDTTGVHSFDID 345
              K   D +VR A+  AVD+  ++   + GY T +    +P+  + Y      + FD  
Sbjct: 298 LENKYLADIKVRHAIAHAVDKDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPA 357

Query: 346 KAKALLAEAGY---ADGFSFTI---KAPQMAYAQRTSQILQAMLAEIGVTMTIETTEFPA 399
           K++ LL EAGY   ADGF F +           ++T++ +   LA++G+ + + T +F A
Sbjct: 358 KSEKLLDEAGYARGADGFRFKLFIDPTQPSGPPKQTAEYIAQALAKVGIKVELRTQDF-A 416

Query: 400 KWVADVLKGADYDMTIVAHAEPMDIDIYARDPYY-------------FNYKNPAFNEVIA 446
            +V  V    D+D+ I   +   D  +  +  Y+               Y NP  + ++ 
Sbjct: 417 TFVKRVFTDRDFDIAIEGMSNLYDPTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLE 476

Query: 447 NVEKTANAGEQEALYGDAQKILAEDVPALFLFVMPKLGVWDRKVKGL 493
                 +  ++  L+ + QK++ ED+P L +     + V+D++VK L
Sbjct: 477 TAAVEIDPKKRLELFNEFQKLVVEDLPTLDIVTPAVITVYDKRVKNL 523