Pairwise Alignments

Query, 511 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 529 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  155 bits (393), Expect = 3e-42
 Identities = 138/500 (27%), Positives = 211/500 (42%), Gaps = 57/500 (11%)

Query: 20  LALGTALWLPLSVVNAEAAPKTALTLGMTVEPTGLDPTIAAPVAIGQVTWQNIFEGLVTI 79
           + +G A  + L++  + A  KT L       P G +P           T +NIF+ LV  
Sbjct: 4   IVIGAASAVILAMAASGAQAKT-LVYCSEGSPEGFNPAFYTTGTTFDATSKNIFDKLVLF 62

Query: 80  D-SKGKVKPQLAESWEISPDGKSYTFKLRKGVTFHDGEAF--------DSAVAKFSLDRA 130
                +++P LAESWE+SPDGK+YTF LRKGVTFHD + F        D  +  F     
Sbjct: 63  KRGTTEIEPGLAESWEVSPDGKTYTFHLRKGVTFHDSDIFKPTRQFNADDVIWSFERQLK 122

Query: 131 R---------GEASVNPQKRFFAAIDSIETPDADTLVLKLKQPAGSLIYWLGWP------ 175
           +         G             ++ IE  D  T+V  L +P   ++  L         
Sbjct: 123 KDHPYHAVSGGTYDYFEGMSMNTLLEKIEKVDDYTVVFHLSRPEAPMLANLAMDFASIFS 182

Query: 176 ---ASVMVAPKSAEANRTTPVGTGPFKFVSWAKGDKVELEKNAAYWDKAVAVKLDKATFR 232
              A  M+   + E     P+GTGPF F  + K  ++  E N  YW    A+  D+  F 
Sbjct: 183 AEYADKMMKAGTPEVVDQKPIGTGPFMFRGYQKDAQIRYEANPTYWQGKAAI--DRLVFV 240

Query: 233 FVADPQAQAAALKSGDIDAFPEFGAPELMTSFDGDKRLGTFVGNTELKVVAGMNNARKPF 292
              D   + A LK+G+    P +  P  + +   DK +               N  +KPF
Sbjct: 241 ITPDASVRYAKLKAGECHVMP-YPNPADLEAMKTDKAVNLMHQEGLNVGYLAYNVEKKPF 299

Query: 293 NDKRVRQALMMAVDRGTVIEGAWSGYGTAIGSHYTPNDRGYVDTTGVHSFDIDKAKALLA 352
           +D RVR+AL +A+D+  +I+  + G GTA  +   P    Y       +FD   AK LLA
Sbjct: 300 DDVRVRKALNLAIDKKAIIDAVYQGAGTAATNPIPPTIWSYNKAVKDDAFDPAAAKKLLA 359

Query: 353 EAGYAD----GFSFTIKAPQMAYAQRTSQILQAMLAEIGVTMTIETTEF-----PAK--- 400
           EAG  D     ++  ++ P    A+R ++ILQA    +GV   I + E+      AK   
Sbjct: 360 EAGVKDLKTTIWAMPVQRPYNPNARRMAEILQANWKAVGVDAEITSYEWGEYLKRAKAGE 419

Query: 401 -------WVADVLKGADYDMTIVAHAEPMDIDIYARDPYYFNYKNPAFNEVIANVEKTAN 453
                  W  D     D  + ++   + +  + YAR      + + +F  +I   +   +
Sbjct: 420 HETALFGWTGD-NGDPDNFLAVLLGCDAIPGNNYAR------WCDKSFENLIQKAKIATS 472

Query: 454 AGEQEALYGDAQKILAEDVP 473
             E+  LY +AQ I  E  P
Sbjct: 473 QEERVKLYEEAQVIFKEQAP 492