Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 75/249 (30%), Positives = 107/249 (42%), Gaps = 2/249 (0%)

Query: 1   MQLRALMYFDELVRTNSMRAAAENLNVAPTAVSRQIENLEYYFGSPLVERSSRGVKLTAA 60
           M +R   Y   L      R AAE   V+   +S QI  LE   G+ L+ERSSR V  T A
Sbjct: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60

Query: 61  GELLAARAGKTLRELDHVHRLIDDLKGLQRGRVTVYANGATVANLLAPVLAQFSLKYPKL 120
           G  L  +A K L E+     + +   G   G + +         LL  ++     ++P+L
Sbjct: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120

Query: 121 RFEVHITSARQAMEALGAAEADLVVSLFAPKLSGVKVRSRTRISYDVIFPAGHALAAQPE 180
              +H     Q +  L   + D +V     + +  K          +  P  HA AA+ E
Sbjct: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180

Query: 181 VSLKELAGMP-LALPDKSFAARQAFDTLFADAGIELDPVFITSSLEMLKELVLGNAAATL 239
           V + EL G   LAL D      QA    FA AG + D  F  +SLE L+ +V   A  TL
Sbjct: 181 VDMLELKGKTVLALGDGHCLRDQALGFCFA-AGAKDDERFKATSLETLRNMVAAGAGITL 239

Query: 240 LPALSVARE 248
           LP L++  +
Sbjct: 240 LPELALPED 248