Pairwise Alignments

Query, 345 a.a., IS5 family transposase from Agrobacterium fabrum C58

Subject, 292 a.a., transposase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.4 bits (111), Expect = 5e-10
 Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 5/143 (3%)

Query: 189 RHAGKTGSAYGYKAHVGVDEGSGLIRRIITTPANVNDTVVADMLVVGDEAYVLADGAYHT 248
           R  G  G  YG+K H+ V+   G++   +T PANV+DT   + +V  D   + AD  + +
Sbjct: 134 RGKGTMGWFYGFKLHLIVNHQGGIVAAKVT-PANVHDTKPMNEMVRSDMDKLYADKGFIS 192

Query: 249 HGREKELKARGIKPRLMRRPNRHHRMLSPRLARFNLLISRRRSAVETTFATLKNRMGLDV 308
                EL+ +G+      R N   +++S     ++  +  RR  +ET    LKN   ++ 
Sbjct: 193 KALSSELQEKGVTLVTNVRKNMKEKVMS----LWDRAMLSRRFIIETINDQLKNISQIEH 248

Query: 309 IRYRGLAKATAQVLLAAMAFNMR 331
            R+R        ++   +A+ ++
Sbjct: 249 SRHRSGHGFMLNMIAGLIAYQLK 271