Pairwise Alignments

Query, 249 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  184 bits (468), Expect = 3e-51
 Identities = 99/209 (47%), Positives = 137/209 (65%), Gaps = 7/209 (3%)

Query: 19  ALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGLNHFDEGSLMVAG---RSYSSKHRDK 75
           A ++VS  V EGE+FG+VGESGSGKST+ R IAGL   + G +   G    +  S+H  +
Sbjct: 328 ASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTFEGIDLTALKSEHERR 387

Query: 76  SFYSDVQMVFQDPYGSLHPRQTVDALLLEPLVIHGLDNRE----QRIARALDEVGLGSGF 131
                +QMVFQ+PY S++PR  +  ++ EP+  H L   E    Q +   L+ VGLG   
Sbjct: 388 PLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMA 447

Query: 132 RFRYSHQLSGGQRQRIAIARALIVEPKILLLDEPTSALDASIQAEILNLLEQARKDRNLT 191
             +Y H+ SGGQRQRI+IARAL   P++L+ DEPTSALD S+QA+ILNLL+  + + NLT
Sbjct: 448 GLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLT 507

Query: 192 FVMVSHDLGVISHMCDRLAVMKSGKVVEM 220
            + +SHDL VI  MCDR+ VM+ G ++E+
Sbjct: 508 MLFISHDLPVIRQMCDRVGVMQMGTLLEV 536



 Score =  133 bits (335), Expect = 7e-36
 Identities = 91/259 (35%), Positives = 144/259 (55%), Gaps = 23/259 (8%)

Query: 3   TVLSIRDMVVDFDG----YIALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGLNHFDE 58
           ++L ++++ +++      + A+ S+++D+  GE  G+VGESG+GKST+  A+  L     
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDL--LSP 59

Query: 59  GSLMVAGRSYSSKHRDKSFY---------SDVQMVFQDPYGSLHPRQTVDALLLEPLVIH 109
              +  G  Y +  +              S +  +FQDP  SL+P  TV+  L E +  +
Sbjct: 60  PGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHAN 119

Query: 110 GLDNREQRIARALD---EVGLGSGFRF--RYSHQLSGGQRQRIAIARALIVEPKILLLDE 164
              + E+   RAL    +VG+        +Y HQ SGG RQR+ IA AL  EP +++ DE
Sbjct: 120 MQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADE 179

Query: 165 PTSALDASIQAEILNLLEQARKDRNLTFVMVSHDLGVISHMCDRLAVMKSGKVVEM-LEA 223
           PT+ALD SIQ +ILNL+ +  K  N+  ++V+HD+GV+S++ DR+AVM  G +VE    A
Sbjct: 180 PTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTA 239

Query: 224 GALESREFTADYTRQLLVA 242
             L + E    YTR L+ A
Sbjct: 240 KVLGTPEH--PYTRSLISA 256