Pairwise Alignments

Query, 249 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  185 bits (469), Expect = 2e-51
 Identities = 108/252 (42%), Positives = 154/252 (61%), Gaps = 16/252 (6%)

Query: 4   VLSIRDMVVDFDGYI----------ALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGL 53
           ++S RD++VD+ G            AL  VS+D+ EGE   +VG SGSGK+TL R IAGL
Sbjct: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333

Query: 54  NHFDEGSLMVAGRSYSSKHRDKSFYSDVQMVFQDPYGSLHPRQTVDALLLEPL-VIHGLD 112
               EG +   GR  +    D  +  + QMVFQDPY SL PR T++AL+ E L  + GLD
Sbjct: 334 VTESEGRIQFQGRPRTENWTD--YRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLD 391

Query: 113 NR--EQRIARALDEVGLGSGFRFRYSHQLSGGQRQRIAIARALIVEPKILLLDEPTSALD 170
            +   +R    L+EVGLG  +  RY H+LSGGQRQR+AIARA+   P+ L+ DEP SALD
Sbjct: 392 GKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALD 451

Query: 171 ASIQAEILNLLEQARKDRNLTFVMVSHDLGVISHMCDRLAVMKSGKVVEMLEAGALESRE 230
            +++A++L+L    +K    + + +SHDLGV+  + DR+ VM+ G+++E  +   +    
Sbjct: 452 VTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSP 511

Query: 231 FTADYTRQLLVA 242
             A YTR+LL A
Sbjct: 512 KEA-YTRRLLSA 522



 Score =  131 bits (330), Expect = 2e-35
 Identities = 77/216 (35%), Positives = 124/216 (57%), Gaps = 12/216 (5%)

Query: 16  GYIALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGLN----HFDEGSLMVAGRSYSSK 71
           G   + SVS D+A GE FGIVGESGSGK+   RA+  L        +GS+   GR     
Sbjct: 20  GQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKM 79

Query: 72  HRDKSFY---SDVQMVFQDPYGSLHPRQTVDALLLEPLVIHGLDNREQRIARALD---EV 125
             ++  +   +++ +VFQ+P  SL+P  T+   L E L++H   + ++R +  LD    V
Sbjct: 80  KENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRV 139

Query: 126 GLGS--GFRFRYSHQLSGGQRQRIAIARALIVEPKILLLDEPTSALDASIQAEILNLLEQ 183
           G+    G    Y H+ SGG RQRI +A  ++++P +L+ DEPT+ALDA IQ +++ L+ +
Sbjct: 140 GIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVE 199

Query: 184 ARKDRNLTFVMVSHDLGVISHMCDRLAVMKSGKVVE 219
             +      +++SHDL +++    R+ VM+ G +VE
Sbjct: 200 LTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVE 235