Pairwise Alignments

Query, 249 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  182 bits (461), Expect = 2e-50
 Identities = 99/237 (41%), Positives = 156/237 (65%), Gaps = 7/237 (2%)

Query: 13  DFDGYIALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGLNHFDEGSLMVAGRSYSSKH 72
           +F   +A+D +S+++   E+ G+VGESGSGK+T  +A+  L + D G +   G     K 
Sbjct: 316 EFKELVAVDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKD 375

Query: 73  RD--KSFYSDVQMVFQDPYGSLHPRQTVDALLLEPLVIHGL-DNREQRIAR---ALDEVG 126
           R   +   S +Q+VFQDP+ SL+PR +V  ++ E L+++G+ +NR+ R+ R   AL   G
Sbjct: 376 RKGMRPLRSKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAG 435

Query: 127 LGSGFRFRYSHQLSGGQRQRIAIARALIVEPKILLLDEPTSALDASIQAEILNLLEQARK 186
           + S    R+ H+ SGGQRQRIAIARA+ +EP+ +LLDEPTSALD S+QA+I+ LL + + 
Sbjct: 436 MPSNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQD 495

Query: 187 DRNLTFVMVSHDLGVISHMCDRLAVMKSGKVVEMLEAGALESREFTADYTRQLLVAS 243
           +R L+++++SHDL V+  +C R+ VM+ GK+VE      + +   TA YT +L+ A+
Sbjct: 496 ERGLSYLVISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTA-YTERLVKAA 551



 Score =  132 bits (333), Expect = 1e-35
 Identities = 89/254 (35%), Positives = 139/254 (54%), Gaps = 18/254 (7%)

Query: 4   VLSIRDMVVDF---DGYI-ALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGL-----N 54
           V+  R + V F   +G + A+  VS  +  GE+  IVGESGSGKS   R + GL      
Sbjct: 25  VIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRAT 84

Query: 55  HFDEGSLMVAGRS---YSSKHRDKSFYSDVQMVFQDPYGSLHPRQTVDALLLEPLVIHGL 111
              +  +   GR    +S + R       + M+FQ+P  SL+P  T+ + ++E +  H  
Sbjct: 85  IAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRR 144

Query: 112 DNREQRIARALD-----EVGLGSGFRFRYSHQLSGGQRQRIAIARALIVEPKILLLDEPT 166
            +R     RAL+     ++        +Y HQLSGGQRQR+ IA AL  +P +L+ DEPT
Sbjct: 145 VSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPT 204

Query: 167 SALDASIQAEILNLLEQARKDRNLTFVMVSHDLGVISHMCDRLAVMKSGKVVEMLEAGAL 226
           +ALD ++QA+ILNL+ + +++  +  ++++HDL V+    D + VM+ G+V E     AL
Sbjct: 205 TALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEAL 264

Query: 227 ESREFTADYTRQLL 240
            +    A YTR+LL
Sbjct: 265 FADPQHA-YTRRLL 277