Pairwise Alignments

Query, 249 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  181 bits (458), Expect = 4e-50
 Identities = 105/246 (42%), Positives = 151/246 (61%), Gaps = 7/246 (2%)

Query: 4   VLSIRDMVVDFDGYIALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGLNHFDEGSLMV 63
           +LS+RD+   +  + AL  +S D+  GE+  +VGESGSGKSTL RA+  L+  D G+ + 
Sbjct: 275 LLSVRDVRKTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALW 334

Query: 64  AGRSYSSKHRDKSFY--SDVQMVFQDPYGSLHPRQTVDALLLEPLVIHG----LDNREQR 117
            GR   +    + +    D+QMVFQDP  SL+PR TV  L+ E  VIH          +R
Sbjct: 335 KGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRER 394

Query: 118 IARALDEVGLGSGFRFRYSHQLSGGQRQRIAIARALIVEPKILLLDEPTSALDASIQAEI 177
           +A  L +VGL +    RY HQ SGGQRQRIAIARAL +EP++++ DE  SALD S+QA++
Sbjct: 395 VAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQV 454

Query: 178 LNLLEQARKDRNLTFVMVSHDLGVISHMCDRLAVMKSGKVVEMLEAGALESREFTADYTR 237
           + LL++ R++  + F+ ++HDL V+    D + VM+ G+VVE+     +      A YTR
Sbjct: 455 IELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQA-YTR 513

Query: 238 QLLVAS 243
            LL AS
Sbjct: 514 ALLAAS 519



 Score =  146 bits (369), Expect = 8e-40
 Identities = 93/260 (35%), Positives = 150/260 (57%), Gaps = 21/260 (8%)

Query: 4   VLSIRDMVVDFD---GYI-ALDSVSVDVAEGESFGIVGESGSGKSTLLRAIAGL-----N 54
           +L +R++ V+F    G + A+ S+S  + +GE+  I+GESGSGKS    AI  L      
Sbjct: 5   LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPG 64

Query: 55  HFDEGSLMVAGR---SYSSKHRDKSFYSDVQMVFQDPYGSLHPRQTVDALLLEPLVIHGL 111
               G +++ GR   +  ++ R +     V M+FQDP   L+P  +V   + E +  HGL
Sbjct: 65  RISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTHGL 124

Query: 112 DNREQR--IARALDEVGLGSGFRF--RYSHQLSGGQRQRIAIARALIVEPKILLLDEPTS 167
              + R    R L  VG+    R   +Y H+ SGGQRQR+ IA AL + P +L+ DEPT+
Sbjct: 125 AGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPTT 184

Query: 168 ALDASIQAEILNLLEQARKDRNLTFVMVSHDLGVISHMCDRLAVMKSGKVVEMLEAGALE 227
           ALD ++QAE+L LL++ +++  +  ++++HDLGV+S + DR+ VM+ G +V   EAG + 
Sbjct: 185 ALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIV---EAGTVR 241

Query: 228 S--REFTADYTRQLLVASEG 245
              +     YT++L+ A+ G
Sbjct: 242 EIYKNPQHPYTQKLIAAAPG 261