Pairwise Alignments

Query, 278 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  226 bits (575), Expect = 1e-63
 Identities = 124/269 (46%), Positives = 177/269 (65%), Gaps = 5/269 (1%)

Query: 4   PLLTVENLRVSFPTRTGLVEAVRGVSFTLGR-ERLGIVGESGSGKSQTGRAIMGLTPKSA 62
           PLL V NL VSF T  G+V+AV+ VSF +   E L IVGESGSGKS +  A+M L PK+A
Sbjct: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNA 64

Query: 63  RIEADT-LRFGDIDLLKASAKERRIMRGKRMAMILQDPKYSLNPVMTIGRQIMETLRTHE 121
           RI  ++ + F   +LL  +  + R +RG R+ MI Q+P  SLNP M +G Q+ E +R H 
Sbjct: 65  RIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHR 124

Query: 122 KIGSGEARQRTLAMLEAVQIRDPERVFDLYPHEVSGGMGQRVMIAMMLVCGPELLIADEP 181
            +   +A+QR L + + V + DP+  +  +PHE SGG  QR+MIAM L+  P++LIADEP
Sbjct: 125 NVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEP 184

Query: 182 TSALDVTVQLEVLDILDKLVRDRGMGLIFVSHDLRLVSSFCDRVLVMYAGKVVEELSSAN 241
           T+ALDVTVQ EVL ++ ++  + GM ++F++HDL +V    DRVLVM  G VVE+ S+  
Sbjct: 185 TTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQ 244

Query: 242 L-KEAKHPYTQGLLNCLPEIGGHRHPLPV 269
           L  + +H YT+ L+N +P+  G + P+ V
Sbjct: 245 LFLQPEHDYTRMLINSIPK--GSKDPVAV 271



 Score =  176 bits (446), Expect = 1e-48
 Identities = 110/263 (41%), Positives = 160/263 (60%), Gaps = 18/263 (6%)

Query: 2   SAPLLTVENLRVSF-------PTRTGLVEAVRGVSFTLGR-ERLGIVGESGSGKSQTGRA 53
           +APLL  E++RV F         R    EAV+G+S  L + E LGIVGESGSGKS  GRA
Sbjct: 273 AAPLLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRA 332

Query: 54  IMGLTPKSARIEADTLRFGDIDLLKASAKERRIMRGKRMAMILQDPKYSLNPVMTIGRQI 113
           ++GL P + +I      F      +A ++++R+   K + M+ QDP  SL+P MT+G  I
Sbjct: 333 LIGLLPSTGQIAFKGQDF------RALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEII 386

Query: 114 METLRTHEK-IGSGEARQRTLAMLEAVQIRDPERVFDLYPHEVSGGMGQRVMIAMMLVCG 172
            E L  H+  I   E  QR    LE V++ DP  + + YPHE SGG  QR+ IA  L+  
Sbjct: 387 TEGLLVHQPHISKLERMQRARRALEEVRL-DPNSI-NRYPHEFSGGQRQRIAIARALILE 444

Query: 173 PELLIADEPTSALDVTVQLEVLDILDKLVRDRGMGLIFVSHDLRLVSSFCDRVLVMYAGK 232
           P  ++ DEPTSALD +VQL V+++L ++ + R +G +F+SHDL +V +  DRVLVM  G+
Sbjct: 445 PSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQ 504

Query: 233 VVEELSSANL-KEAKHPYTQGLL 254
           V+E+ S+ ++    +H YT+ L+
Sbjct: 505 VMEQGSAESIFHNPQHEYTKKLI 527