Pairwise Alignments

Query, 278 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  235 bits (599), Expect = 1e-66
 Identities = 127/272 (46%), Positives = 182/272 (66%), Gaps = 3/272 (1%)

Query: 5   LLTVENLRVSFPTRTGLVEAVRGVSFTLGR-ERLGIVGESGSGKSQTGRAIMGLTPKSAR 63
           LL V++LRV F T+ G+V AV  ++F+L + E LGIVGESGSGKSQT  AIMGL  K+ +
Sbjct: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63

Query: 64  IEADTLRFGDIDLLKASAKERRIMRGKRMAMILQDPKYSLNPVMTIGRQIMETLRTHEKI 123
           I     +F   ++L    +E   +R +++AMI QDP  SLNP M +  Q+ME L  H+ +
Sbjct: 64  ITGSA-KFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122

Query: 124 GSGEARQRTLAMLEAVQIRDPERVFDLYPHEVSGGMGQRVMIAMMLVCGPELLIADEPTS 183
           G  EA + ++ MLEAV+I +  +   +YPHE SGGM QRVMIAM L+C P+LLIADEPT+
Sbjct: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182

Query: 184 ALDVTVQLEVLDILDKLVRDRGMGLIFVSHDLRLVSSFCDRVLVMYAGKVVEELSSANL- 242
           ALDVTVQ +++++L++L R+    +I ++HDL +V+  CD+VLVMYAG+ +E  S  ++ 
Sbjct: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242

Query: 243 KEAKHPYTQGLLNCLPEIGGHRHPLPVLERKP 274
               HPY +GLL+ +P +      LP +   P
Sbjct: 243 YNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNP 274