Pairwise Alignments

Query, 278 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 536 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  218 bits (555), Expect = 2e-61
 Identities = 119/257 (46%), Positives = 171/257 (66%), Gaps = 3/257 (1%)

Query: 4   PLLTVENLRVSFPTRTGLVEAVRGVSFTLGR-ERLGIVGESGSGKSQTGRAIMGLTPKSA 62
           PLL+V +LRVSF     + EAVRGVSF++GR E + +VGESGSGKS +  + + L   SA
Sbjct: 13  PLLSVRDLRVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGSGKSVSALSTVSLLGDSA 72

Query: 63  RIEADTLRFGDIDLLKASAKERRIMRGKRMAMILQDPKYSLNPVMTIGRQIMETLRTHEK 122
            +   ++ +   +++ AS +  R +RG  ++ I Q+P  SLNP+ TI +Q+ E+L  H+ 
Sbjct: 73  TVSG-SVTYDGTEMVGASERHLRQVRGNDISFIFQEPMTSLNPLHTIEKQLAESLALHQG 131

Query: 123 IGSGEARQRTLAMLEAVQIRDPERVFDLYPHEVSGGMGQRVMIAMMLVCGPELLIADEPT 182
           +G   AR+R + +L  V IRD E   D YPH++SGG  QRVMIAM L   P++LIADEPT
Sbjct: 132 LGGAAARERIVDLLNRVGIRDAETRLDAYPHQLSGGQRQRVMIAMALANKPDILIADEPT 191

Query: 183 SALDVTVQLEVLDILDKLVRDRGMGLIFVSHDLRLVSSFCDRVLVMYAGKVVEELSSANL 242
           +ALDVT+Q+++LD+L  L    GMGL+F++HDL +V    DRV VM AG++VE   +A +
Sbjct: 192 TALDVTIQVQILDLLADLKASEGMGLLFITHDLSIVRRIADRVCVMQAGEIVESGPTAEI 251

Query: 243 -KEAKHPYTQGLLNCLP 258
               +HPYT+ LL+  P
Sbjct: 252 FANPQHPYTRKLLDAEP 268



 Score =  148 bits (374), Expect = 2e-40
 Identities = 101/259 (38%), Positives = 144/259 (55%), Gaps = 17/259 (6%)

Query: 5   LLTVENLRVSFPTRTGL-------VEAVRGVSFTL-GRERLGIVGESGSGKSQTGRAIMG 56
           L+  E+L+V FP + G        V+AV   S ++   E LGIVGESGSGK+    AIM 
Sbjct: 282 LIRTEDLKVWFPIQKGFLKRTVGHVKAVNPTSLSVRAGETLGIVGESGSGKTTLALAIMR 341

Query: 57  LTPKSARIEADTLRFGDIDLLKASAKERRIMRGKRMAMILQDPKYSLNPVMTIGRQIMET 116
           L     R+E     F   DL + S ++ R +R   M ++ QDP  +L+P MT  + I E 
Sbjct: 342 LIASEGRVE-----FQGQDLRQWSTRDLRRLRAD-MQIVFQDPFGALSPRMTCAQIIAEG 395

Query: 117 LRTHEKIGSGEARQRTLAMLEAVQIRDPERVFDLYPHEVSGGMGQRVMIAMMLVCGPELL 176
           L  H      + R     ++  V + DP    D YPHE SGG  QR+ IA  +V  P+L+
Sbjct: 396 LAIHNVDQDRDPRDLVAEVMSEVGL-DPA-FMDRYPHEFSGGQRQRIAIARAMVLRPKLV 453

Query: 177 IADEPTSALDVTVQLEVLDILDKLVRDRGMGLIFVSHDLRLVSSFCDRVLVMYAGKVVEE 236
           + DEPTSALD+TVQ++++++L  L    G+  +F+SHDL +V +   +++VM  G VVE 
Sbjct: 454 VLDEPTSALDMTVQVQIVNLLRDLQERYGLAYLFISHDLNVVRAMSHKMIVMKQGDVVEA 513

Query: 237 LSSANL-KEAKHPYTQGLL 254
            S+A L      PYTQ LL
Sbjct: 514 GSAAELFNNPSDPYTQQLL 532