Pairwise Alignments

Query, 545 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 504 a.a., peptide ABC transporter from Sinorhizobium meliloti 1021

 Score =  177 bits (449), Expect = 8e-49
 Identities = 152/503 (30%), Positives = 240/503 (47%), Gaps = 47/503 (9%)

Query: 5   LNKSMRVLSTSAALSLMMLSAPHAFAATPADTLVEGFAIDDIITLDPGEAFELSAAEVTG 64
           + K    +  +A  + +MLSA +A AA     ++     +D  T DP ++ +     V  
Sbjct: 1   MTKRWNKIGRAAFAAALMLSAGYAEAAG----ILSIGRREDSTTFDPIKSAQNVDNWVFS 56

Query: 65  NTYSKLVSIDLNDTSKVIGDLAESWTTSEDGLTYTFKLKSGLKFASGNPITADDVAFSFE 124
           N +  LV +D   T K+   LAESWT S+DGLTYTFK++   KF+ G+PITA+D AFS  
Sbjct: 57  NVFDVLVRVDKTGT-KLEPGLAESWTLSDDGLTYTFKIRDA-KFSDGSPITAEDAAFSLL 114

Query: 125 RAVKLDKSPAFLLTQFGLKGDN--VNEKAKAADANTFVLTVDKPYAPSFVLNVLTATVAA 182
           R    + S         L  D+  + E A+AAD  T V+ +  P AP   L+ L     +
Sbjct: 115 RIRDHEGS---------LWSDSYKIIETAEAADPKTLVVKLKTPSAP--FLSTLALPNVS 163

Query: 183 VVDKKLITEKAKSVTPSADYKYDTDFGNEFLKTGYAGSGPYKILGWKANEAVILEANPNY 242
           V+ KK +     +                F +   A SG + +  W+  + VILE NPN+
Sbjct: 164 VLSKKAVEAGEDA----------------FAELPTASSGAFTVKEWRRGDRVILEKNPNF 207

Query: 243 Y-GEKPKLKRVVYRHMKESSGQRLALENGDIDVARNLEPGDMEAVSKKEGLAVTSAPKGT 301
           +  ++ KL  V +  + + + + L ++ G +D A  +    +E + K   L V       
Sbjct: 208 WQADRVKLDGVEWISVPDDNTRMLNVQAGQLDTAIFVPFSRVEELKKDPNLTVHIDTSTR 267

Query: 302 VYYFSLNQKNENLKKPEVVEALKYLVDYDAIGATIIKGIGEVHQTFLPKGQLGALDEN-P 360
             +  +N ++  L K EV +AL   +D  AI  T+  GIG V  +++PKG L   D N  
Sbjct: 268 EDHLLINHEHGMLAKKEVRQALDMAIDKKAIVDTVTFGIGTVANSYIPKGSLYHYDANYQ 327

Query: 361 YKLDVAKAKELLAKAGLKDGFTVTMDVRNTQPV-TGIAESVQQTLAQAGIKLEIIPGDGK 419
           Y  D  KAK +LA+AG  D  T+   V     V   IA  +QQ  A+AG+ + +   D  
Sbjct: 328 YPYDPEKAKAMLAEAGASD-LTLNYVVNAGNEVDEQIAVLLQQQFAKAGVTVNLQKVDAS 386

Query: 420 QTLTKYRARTHDIYIGQWGSDYFDPNSNAETFTINYDNSDEGKNKTLAWRNAWDVPDLTK 479
           Q+     A  +DI +  W +D  DP+    TF + +D +       + +   ++   + +
Sbjct: 387 QSWDMLVAGDYDISVMYWTNDVLDPDQKT-TFVLGHDTN-------MNYMTRYNSEKVKE 438

Query: 480 ETQSALLEKDTAKRAAIYQNLQK 502
              +A LE D AKR A+Y ++QK
Sbjct: 439 LVAAARLELDPAKREAMYVDIQK 461