Pairwise Alignments

Query, 275 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

Subject, 327 a.a., spermidine/putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  130 bits (326), Expect = 5e-35
 Identities = 86/279 (30%), Positives = 148/279 (53%), Gaps = 10/279 (3%)

Query: 5   RAEALALALPAAIFAAAVFLVPVFMLLSEGF-----RTTDG---WTLSAYAAFFSDPLNQ 56
           RA    LA     + AA+ + P+F +    F     +  DG   +TL+ Y  FFSD L  
Sbjct: 45  RARLALLAGVPLFWIAALHIGPIFQMGRISFMADYPQAPDGGSPYTLANYELFFSDQLYF 104

Query: 57  TVFLRTLKLGALVTVVSAVVGYAAAFAIINL-SPGKKGHVVNLVVLPLMISPVARTYAWI 115
             F+R+L   A+VT+ + V+ Y  A+ +  +  P  +   + L+++P     + RT++ I
Sbjct: 105 MPFIRSLIFAAVVTISTLVIVYPVAYYVAKIVQPKNRMRALLLLLIPFWAGELIRTFSVI 164

Query: 116 VILGRTGIVNQALQAVGLSDAPIRILFSETAVFIGLLQLFLPLMIISLISALENMPKDTI 175
           ++L   G VN AL+ +G  D PI +L++  ++  G++ L    M++ L SA+E +P   I
Sbjct: 165 MLLANRGAVNVALRELGFIDRPIPMLYTSFSLSFGVIYLLALYMLLPLYSAIEKIPTPLI 224

Query: 176 AAARVLGANWFQVFWKVILPLTKEGLVVGGTLVFTGSLTAYITPAILGGSKVLMLETLLY 235
            AA  LGA  FQ F +VILPL+K+G+V G +LV+  S+  +  P +LGG   ++   ++ 
Sbjct: 225 HAAADLGAGPFQRFRRVILPLSKDGIVSGCSLVYLTSVGVFAAPLLLGGPNTVIFPEVIA 284

Query: 236 QQVTVSNN-FVAASVIAFILIVMSFAANILLKRIATARN 273
                SN+ +   +  A +L+ +S +   L  R+   R+
Sbjct: 285 TLFHSSNDKWPEGAAFAMLLLAVSLSTVGLFMRVIGGRS 323