Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (406), Expect = 3e-44
 Identities = 98/300 (32%), Positives = 164/300 (54%), Gaps = 12/300 (4%)

Query: 4   LSRKLLPSTSALAAFDSVARLGSFSAAADELALTQGAISRQVMSLEEQLGVRLFERGARG 63
           +SR+L P  ++L  F++ AR  SF+ AA+EL +TQ A+S Q+ +LEE LG++LF R  R 
Sbjct: 1   MSRRL-PPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRS 59

Query: 64  VSLTTEGSAYAKSIAAALGEIRSASLQIMTKTHGNTLNLAMLPTFGTRWLLPRIPDFVAN 123
           + LT EG +Y   I      +  A+ +++ ++    L +++ P+F  +WL+PR+ DF   
Sbjct: 60  LLLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQ 119

Query: 124 HPEITINFATRIGQFDFER----EQLDMAIHIGQADWPGAESTFLMHEMVAPVCSPQFLS 179
            P+I +    RI   D +     + +D+AI+ G+  WPG  +  L  E + P+CSP  L 
Sbjct: 120 EPDIDV----RIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLL 175

Query: 180 AH-PVEKGEDIAALPLLHMASRPGAWGHWFESLGL-SLALPQGMRFEQFSSVAQACIAGL 237
            + P+EK  D+A   LLH  SR   W  + +  GL ++ +  G  F   + V QA   G 
Sbjct: 176 GNKPMEKLSDLAYHTLLHDTSRKD-WKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQ 234

Query: 238 GVALMPLFLIDNELKSKQLVKAFDHQARSPSSYYAVAPLSRANHAPVVLFRDWLVRQVEA 297
           GVAL    L   E+ + +L+  FD    + +++Y V    +A+   +  FRDW++++  +
Sbjct: 235 GVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARS 294