Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 309 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  173 bits (439), Expect = 4e-48
 Identities = 106/302 (35%), Positives = 165/302 (54%), Gaps = 8/302 (2%)

Query: 4   LSRKLLPSTSALAAFDSVARLGSFSAAADELALTQGAISRQVMSLEEQLGVRLFERGARG 63
           +++ +LP  +AL AF+S AR  SF+ A +EL +T GAIS+Q+ +LE  L V LF R  + 
Sbjct: 3   MNQLILPPLNALRAFESAARHLSFTRAGNELFVTHGAISKQIKTLESYLDVSLFNRQHKQ 62

Query: 64  VSLTTEGSAYAKSIAAALGEIRSASLQIMTKTH-GNTLNLAMLPTFGTRWLLPRIPDFVA 122
           +SLT EG  Y + I++AL  I  A+ ++ ++      L++ +LP+    WL+PR+ +F A
Sbjct: 63  LSLTPEGERYLRHISSALQSISQATEELRSQPGIAQALSINVLPSLTINWLIPRLEEFKA 122

Query: 123 NHPEITINFATRIGQFDFEREQLDMAIHIGQADWPGAESTFLMHEMVAPVCSPQFLSAHP 182
            HP + ++ +    Q DF+R++ D+AI              LM E +  VC+PQ   A  
Sbjct: 123 RHPHLYVDLSIGDFQVDFKRDKYDVAIRSATVRPTHCHVLKLMDEDLCLVCAPQL--AKQ 180

Query: 183 VEKGEDIAALPLLHMASRPGAWGHWFESLGLSLALPQGMRFEQFSSVAQACIAGLGVALM 242
           ++  +DI    LL   +RP  W  W E +GL L   + +  E F  ++QA ++G+G+AL+
Sbjct: 181 IDSLQDINRQTLLKHTTRPELWPLWAEKVGLKLTTDKMLGMEHFYMLSQAAVSGMGLALI 240

Query: 243 PLFLIDNELKSKQLVKAFDHQARSPSSYYAVA---PLSRANHAP--VVLFRDWLVRQVEA 297
           P F I+ EL    LV     Q  SP +YY +    P S+ +  P  V  F DWL+     
Sbjct: 241 PRFFIEKELAEDSLVIPLATQFTSPYAYYVLTPNLPPSKQSERPLKVQAFIDWLLEIFAP 300

Query: 298 YR 299
           YR
Sbjct: 301 YR 302